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SCNpilot_expt_500_p_scaffold_25835_1

Organism: SCNPILOT_CONT_300_BF_Flavobacteriales_36_9

partial RP 33 / 55 MC: 7 BSCG 34 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(3..1496)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 498.0
  • Bit_score: 973
  • Evalue 1.10e-280
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 498.0
  • Bit_score: 961
  • Evalue 9.70e-278
DNA-directed RNA polymerase subunit beta' n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T3J7_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 498.0
  • Bit_score: 968
  • Evalue 3.30e-279

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Taxonomy

Epilithonimonas lactis → Epilithonimonas → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1494
ATGTCAAATAAAAATAAAACAAGTCGATTTAATAAAATCACTATTGGTTTAGCTTCACCAGAATCCATTCTTCAGGAATCGAGAGGAGAAGTTCTAAAACCGGAAACGATCAACTATCGTACGCACAAGCCGGAAAGAGACGGTTTGTTCTGCGAGAAGATCTTTGGTCCTGTAAAAGACTACGAATGTGCTTGTGGAAAATACAAAAGAATCCGTTACAAAGGGATTGTTTGTGATAGATGTGGGGTAGAAGTTACAGAGAAAAAAGTACGTAGAGAGAGAATTGGACACATCAACCTTGTTGTGCCTGTGGCTCACATCTGGTATTTCCGTTCTTTACCGAACAAAATTGGTTATCTGCTAGGAATTCCTTCCAAGAAATTGGATATGATTATCTACTACGAGAGATATGTAGTGATTCAGCAAGGTATTGCTAAGAAAGCAGACGGTTCAGATTTCGATGATAAAGAATTCCTGACAGAAGAAGAATATCTGGATGTTCTGGAGACACTTCCTGTAGAGAATCAATATCTTGATGATTCTGATCCGAATAAATTCGTTGCTAAAATGGGAGCGGAAGCGGTTGAAGAATTGCTGAGAAGAATCGACCTAGATTCATTATCATTCGATTTGAGACACAAAGCGCACAACGAGTCTTCTAAACAAAGAAGAACAGAGGCTCTTAAGAGACTTAATGTTGTAGAAGCGCTTAGAGCGGCTAATACAAGAATGATCAACCGTCCGGAATGGATGATTATGAGAGTTCTTCCTATCATACCACCAGAACTAAGACCATTGGTTCCATTGGATGGAGGACGTTTCGCAACTTCTGACCTTAATGACCTTTATAGAAGAGTTATTATCAGAAACAACCGTTTGAAGAGATTATTGGAGATCAAAGCTCCTGAAGTAATCTTGAGAAACGAGAAGCGTATGCTTCAGGAATCAGTAGATTCATTGTTCGATAACACCAGAAAATCTTCTGCTGTTAAGTCGGAATCCAACAGACCATTGAAATCACTTTCTGATTCATTGAAAGGTAAGCAAGGTCGTTTCCGTCAGAACTTATTAGGAAAAAGGGTAGATTACTCAGCGCGTTCGGTTATTGTTGTAGGTCCTAGCTTACAATTGCACGAGTGTGGTCTTCCAAAAGATATGGCTGCTGAGCTTTACAAACCGTTTATCATTAGAAAACTAATTGAGAGAGGAATTGTAAAAACAGTAAAATCAGCTAAGAGAATCATCGACAGAAAAGAGCCTGTAGTTTATGATATCCTTGAAAATGTGATGAAAGGTCACCCTGTTCTTCTGAACAGAGCACCTACGCTTCACAGATTGGGTATCCAGGCGTTCCAGCCTAAGATGATTGAAGGTAAAGCGATCCAACTTCACCCATTGGTAACAACGGCTTTCAACGCCGATTTCGATGGTGACCAGATGGCGGTTCACTTACCGTTAGGACCAGAAGCAATTTTGGAAGCTCAGTTATTAATG
PROTEIN sequence
Length: 498
MSNKNKTSRFNKITIGLASPESILQESRGEVLKPETINYRTHKPERDGLFCEKIFGPVKDYECACGKYKRIRYKGIVCDRCGVEVTEKKVRRERIGHINLVVPVAHIWYFRSLPNKIGYLLGIPSKKLDMIIYYERYVVIQQGIAKKADGSDFDDKEFLTEEEYLDVLETLPVENQYLDDSDPNKFVAKMGAEAVEELLRRIDLDSLSFDLRHKAHNESSKQRRTEALKRLNVVEALRAANTRMINRPEWMIMRVLPIIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLLEIKAPEVILRNEKRMLQESVDSLFDNTRKSSAVKSESNRPLKSLSDSLKGKQGRFRQNLLGKRVDYSARSVIVVGPSLQLHECGLPKDMAAELYKPFIIRKLIERGIVKTVKSAKRIIDRKEPVVYDILENVMKGHPVLLNRAPTLHRLGIQAFQPKMIEGKAIQLHPLVTTAFNADFDGDQMAVHLPLGPEAILEAQLLM