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SCNpilot_expt_500_p_scaffold_27724_3

Organism: SCNPILOT_CONT_300_BF_Flavobacteriales_36_9

partial RP 33 / 55 MC: 7 BSCG 34 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 1438..1908

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W2N0_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 157.0
  • Bit_score: 281
  • Evalue 5.80e-73
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KIC61250.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 157.0
  • Bit_score: 285
  • Evalue 4.30e-74
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 157.0
  • Bit_score: 168
  • Evalue 1.70e-39

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Taxonomy

Chryseobacterium taiwanense → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 471
TTGAAAAATAAGGACGAAAATGGTTTTCATCATCTGTATGACAACTATTCTGGTGCACTTTATGGTGTTATCCTGCGGATAGTCTGCTCCAAAGAATATACTGAAGATGTCATCCAGGATGTCTTTGTCAAAATCTGGAATTCTATCCATCAATACGATGCTTCAAAAGGCAGATTTTATACATGGATGATCAATATCGCAAGGAATACAGCCATTGATTATCTGAAATCGAAAGGATTCCAGAACGAACTCAAAAACCAACCGCTCCCGGATTTCGTATATAACACTGCAGAACTTTCAACAACCAATGAAGAGTCTGACTTTATTGGACTGAAAAATGTTCTGGAAAGCCTGGAAGCTGATAAGCAGGAACTTATAAATATGGCATATTATCAGGGATTTACCCAAAATGAAATATCCGAAAAACTGAAGATCCCGCTGGGAACCGTAAAAACCAAAATGCGTAATGCA
PROTEIN sequence
Length: 157
LKNKDENGFHHLYDNYSGALYGVILRIVCSKEYTEDVIQDVFVKIWNSIHQYDASKGRFYTWMINIARNTAIDYLKSKGFQNELKNQPLPDFVYNTAELSTTNEESDFIGLKNVLESLEADKQELINMAYYQGFTQNEISEKLKIPLGTVKTKMRNA