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SCNpilot_expt_500_p_scaffold_28111_1

Organism: SCNPILOT_CONT_300_BF_Flavobacteriales_36_9

partial RP 33 / 55 MC: 7 BSCG 34 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(3..935)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CN54_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 311.0
  • Bit_score: 534
  • Evalue 9.90e-149
  • rbh
RNA polymerase sigma54 factor {ECO:0000313|EMBL:KFC18800.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 312.0
  • Bit_score: 561
  • Evalue 8.10e-157
RNA polymerase sigma-54 factor rpoN; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 316.0
  • Bit_score: 510
  • Evalue 4.80e-142
  • rbh

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Taxonomy

Epilithonimonas sp. FH1 → Epilithonimonas → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 933
ATGCTAAAGCAAAATCTACAACTTAAACTCGGTCAAAAACTAGCGCCTCAACAGATCCAATTGATGAAGCTGATACAACTTCATACTTTGGAGTTTGAAGAGGAATTGGAAAGAGAACTGGAAGAAAACCCCGCTTTAGAAAAAGTAGCGGATGAAAATGCGGAAGAAGACTATTCCAAAGCAGACGAAGAATACGAAAGTGAGGGCAATGAAAGTATCGAAACAGATTTTGATGTTGATGAATATCTTTACGATGACGAACCAAGCTATAAAACCGCAAGCAGTAATTATTCCGCCGATGATGAAGAATTTGACAATCAGTCCCTTTTAACAGAAGGTCAGACACTTTACGATTATCTCTTGGAACAAATTCGGCTTTCTAATATTGATGAAGAAGATTTGAAAATTGCAGAATATATTATCGGAAACCTTGATACAGACGGCTACCTGAGAAGAGAAATCAAATCCATCGTTGATGACCTAGCATTCTCACAAGGTATATATACAACTATCGAAAAAGTAACCGATATTCTTGAAAATTATGTTCAAAAACTGGATCCGCCAGGTGTTGGCGCAAGAGATCTGAGAGAATGCCTTCTTTTGCAGATTGAGAAAAAAGTAAGCTCTGACTCCGCGGTAATTTTAGCAGGAAACATCCTGCGAAATCAGTTTGATGCATTAGCAAATAAGCATTACAATAAAATCCTTCAGAAGTATGACATCGAAGAAGAGGATCTGAAAGAAGCTTTGGACGAAATCTCAAGATTATCGCCAAAAGTTGGAGGAAACTTTGATACACAAACGATCACTATTAATCAAGAGATTATTCCGGACTTTGTGATTCAAATCAAAGACAACCAGGTTATCCCTTCTTTGAATAATAAAAATGCGCCCACTCTAAGGGTTTCTGAAGAGTATAAAGAAATCCTATCA
PROTEIN sequence
Length: 311
MLKQNLQLKLGQKLAPQQIQLMKLIQLHTLEFEEELERELEENPALEKVADENAEEDYSKADEEYESEGNESIETDFDVDEYLYDDEPSYKTASSNYSADDEEFDNQSLLTEGQTLYDYLLEQIRLSNIDEEDLKIAEYIIGNLDTDGYLRREIKSIVDDLAFSQGIYTTIEKVTDILENYVQKLDPPGVGARDLRECLLLQIEKKVSSDSAVILAGNILRNQFDALANKHYNKILQKYDIEEEDLKEALDEISRLSPKVGGNFDTQTITINQEIIPDFVIQIKDNQVIPSLNNKNAPTLRVSEEYKEILS