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SCNpilot_expt_500_p_scaffold_53652_1

Organism: SCNPILOT_CONT_300_BF_Flavobacteriales_36_9

partial RP 33 / 55 MC: 7 BSCG 34 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(2..595)

Top 3 Functional Annotations

Value Algorithm Source
pectate lyase (EC:3.2.1.-) similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 199.0
  • Bit_score: 264
  • Evalue 3.80e-68
CHU large protein candidate pectate lyase, polysaccharide lyase family 1 protein {ECO:0000313|EMBL:ABG58437.1}; EC=3.2.1.- {ECO:0000313|EMBL:ABG58437.1};; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 199.0
  • Bit_score: 264
  • Evalue 1.70e-67
CHU large protein; candidate pectate lyase, polysaccharide lyase family 1 protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11VX9_CYTH3 similarity UNIREF
DB: UNIREF100
  • Identity: 59.8
  • Coverage: 199.0
  • Bit_score: 264
  • Evalue 1.20e-67

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Taxonomy

Cytophaga hutchinsonii → Cytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 594
ATGAAAAGAATATTTTTAATACTTACATTATTAACATCAACTATTGTAACTAATTTATTTGCACAATGTAATGTTGCAGGCTGGGCTTCTACCAATGGTGTTACTGGTGGCGGAACTGCTGCTCCGACTGTTGTGACAACCTATGCAGAGCTGAGAACCGCCGTAAACAGTACAGCTGTAAAAGTCATTCATGTTTCGGGGCAAATCACTTTTCCAAGTGCGGGAAGATTGACGCTTAATAATCAAACCAACAAATCGATATTAGGTCTGGCCGGAGCAAGATTGATTTCAACAGATCTTACAGCTGGGGGTTCCGGAATTTTGACTTTGAAAAACAGTTCCAACGTTCTCATCAAAAACATCACTTTCGAAGGTCCCGGTGCTTATGATGTGGATGGAAATGATAATATGACAATTGATAATTGTACTAATGTCTGGGTGGATCATTGTACCTTTCAGGATGCTTTGGACGGCAATCTTGACATCAAAAATGGTTCTGATCTTATTACAATTTCCTGGACAAAGTTCGAATATCTGAAAGCGCCGATTCCTGGAGGTTCCGGAGGAAGTAATGATCACAGATTCTCCAATTTA
PROTEIN sequence
Length: 198
MKRIFLILTLLTSTIVTNLFAQCNVAGWASTNGVTGGGTAAPTVVTTYAELRTAVNSTAVKVIHVSGQITFPSAGRLTLNNQTNKSILGLAGARLISTDLTAGGSGILTLKNSSNVLIKNITFEGPGAYDVDGNDNMTIDNCTNVWVDHCTFQDALDGNLDIKNGSDLITISWTKFEYLKAPIPGGSGGSNDHRFSNL