ggKbase home page

SCNpilot_expt_500_p_scaffold_6081_7

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: comp(4198..5391)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia felis ATCC 53690 RepID=K8NQI6_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 396.0
  • Bit_score: 562
  • Evalue 2.60e-157
  • rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKS28483.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 396.0
  • Bit_score: 562
  • Evalue 3.60e-157
membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 396.0
  • Bit_score: 549
  • Evalue 7.00e-154
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGCCGTCTGAGCAGCCAAAGCACGTTTCCGTCCGCAAGCTGCGGCTCGCCGGCCTGATCGCCGGCGTGGTGATCGTGCTTGTCGTCGTGTTCGGCATTGTCGCGCGCGAGAACAGCGATGCCAAGCTGCGGGCGTGGACCGATGCGCAGGCGGTGCCGAGCGTGGCCGTCGGCAAACCCAACACCAAGCCGGTCGGCGCCACCATCACGCTGCCGGGCCGCATCGAGGCCTATTCGCGCGCACCGATCTATGCGCGTGTCAGCGGTTACCTGAAGAGCTGGAACGTCGATATCGGCGCGAAGGTAAAGTCCGGCGATCTGCTTGCCGAGATCGAGGCGCCGGACCTCGACCAGCAATTGTTGCAGGCGCGCGCCGATCTCGCCAATGCGCAGGCGGCGGCGAAATTGTCTGCCGCCACGTTGAAGCGTCGCCAGACATTGCTGTCGTCCAACTTCGTCTCGCAGCAGGAGATTGACGAGCGCTCGGCGGACCTCGCCAGCAAGGAAGCGCAGGTCAAGGCGATGCAGGCCAATGTTGATCGCCTTCAGGCGCTGACCGGCTACAAGCGTGTCGAAGCGCCGTTCGACGGCATCGTGATCGAGCGCAACACCGATGTCGGCGCGCTGATCAGTGGCGGCGGCGGCTCGGGTCCGGCGATGTTCGTGATCGCCGACATGCAGAAGCTGCGTGTCTATGTCAGCGTGCCGCAGAGCTATCTCGCCGCGATCCGCACCGGCTCCGAGGCCAATATCTCGGTGCCGGAATATCCCGGCCGCCGGTTTGTGGCGACGGTGGAGAGTTCGGCGCAGGCGGTCGATATCTCGACCGGCACCACGCGGATGCAGCTTGCGCTGGACAATTCCGGCGGCGAGTTGCGGCCCGGCGCGTTCGCCAATGTCCAGCTCAAGCTGTCGGGCGATGCCGCGCCGCTGTCGATTCCGGCCGGCGCGCTGGTGTTCAACAAAAGCGGGCTCAGCGTCGCGACCGTGGATGACAACGATCGCATCCGCTTCAAGACGGTGACGATCGCGCGCGACCTCGGCCGCGAGATCGAGATCGCGACCGGCCTGTCGCCGCACGACACCATCGTCGTCACGCCGCTCGACGGCATCGTGGATGGTGATCAGGTTCGCGTCGCGGGCCGGGAGTCCAAAGGCAGTGCCGAAAAGAAGACCTCCGACGCGGAGCGGTAG
PROTEIN sequence
Length: 398
MPSEQPKHVSVRKLRLAGLIAGVVIVLVVVFGIVARENSDAKLRAWTDAQAVPSVAVGKPNTKPVGATITLPGRIEAYSRAPIYARVSGYLKSWNVDIGAKVKSGDLLAEIEAPDLDQQLLQARADLANAQAAAKLSAATLKRRQTLLSSNFVSQQEIDERSADLASKEAQVKAMQANVDRLQALTGYKRVEAPFDGIVIERNTDVGALISGGGGSGPAMFVIADMQKLRVYVSVPQSYLAAIRTGSEANISVPEYPGRRFVATVESSAQAVDISTGTTRMQLALDNSGGELRPGAFANVQLKLSGDAAPLSIPAGALVFNKSGLSVATVDDNDRIRFKTVTIARDLGREIEIATGLSPHDTIVVTPLDGIVDGDQVRVAGRESKGSAEKKTSDAER*