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SCNpilot_expt_500_p_scaffold_6097_3

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: 1199..2014

Top 3 Functional Annotations

Value Algorithm Source
xthA1; exodeoxyribonuclease III (EC:3.1.11.2); K01142 exodeoxyribonuclease III [EC:3.1.11.2] similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 271.0
  • Bit_score: 478
  • Evalue 1.80e-132
  • rbh
Exodeoxyribonuclease III Xth n=1 Tax=Afipia sp. 1NLS2 RepID=D6V1D8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 271.0
  • Bit_score: 490
  • Evalue 1.10e-135
  • rbh
Exodeoxyribonuclease III {ECO:0000313|EMBL:CEG10092.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 271.0
  • Bit_score: 492
  • Evalue 3.10e-136

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGCGTTTTTCCGTCACCACCTGGAACATCAATTCGGTGCGCCTGCGCATCGAGCTTGTCGCCAAACTCCTGAAAAGCGCGCGGCCGGACGTGCTGTGCCTGCAGGAAACCAAGTGCCCCGACGACGCCTTCCCGCTCAAGCGGCTGAAGCAGCTCGGCTACGAGCACATCGCCATCAACGGCCAGAAGGGTTATCACGGCGTCGCCATCGCCTCGAAGCTGCCGTTCGACTCGAGCGACGTACGCACCTTCTGCGGCAAGGTGGATTCGCGTCACATCTCGGTGGCGTTCGGCGAAAAGGCCGGGCTTGGCGCGCCGCTGGTGCTGCATAATTTCTACGTGCCGGCGGGCGGCGACATTCCAGATCCGGTGGCCAATCCGAAATTCGAACACAAACTGTCCTTCCTCGACGAGATGCGGGACTGCGATCCGTTGCATCCGCGGAATGGAGAGCGTCACATCCTGGTCGGCGATCTCAACGTCGCGCCGTTCGAACATGACGTGTGGTCGCACAAGCAGCTTCTCAACGTGGTGTCGCACACGCCGATCGAATGCGAGAAACTGCTCGCGGTGAGGAATTCAGGCGACTGGATCGACATCGCACGGCAGCGCATTTCCGAATCCGAGAAGGTCTACACTTGGTGGAGCTACCGCGCCGCCGACTGGACGGTCGGCAATCGCGGCCGCCGGCTCGATCACATCTGGGCGTCGCAGGCGCTTGGCGACAAGATTGCCGACTTCAAGATCCTGCGCGACGCACGGAGCTGGGAGCGTCCCTCCGACCATGTGCCGGTGACCGCGACGTTCGATCTGTAA
PROTEIN sequence
Length: 272
MRFSVTTWNINSVRLRIELVAKLLKSARPDVLCLQETKCPDDAFPLKRLKQLGYEHIAINGQKGYHGVAIASKLPFDSSDVRTFCGKVDSRHISVAFGEKAGLGAPLVLHNFYVPAGGDIPDPVANPKFEHKLSFLDEMRDCDPLHPRNGERHILVGDLNVAPFEHDVWSHKQLLNVVSHTPIECEKLLAVRNSGDWIDIARQRISESEKVYTWWSYRAADWTVGNRGRRLDHIWASQALGDKIADFKILRDARSWERPSDHVPVTATFDL*