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SCNpilot_expt_500_p_scaffold_6113_6

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: comp(3693..5015)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017462F5 similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 440.0
  • Bit_score: 444
  • Evalue 1.50e-121
  • rbh
ABC transporter ATP-binding protein; K09691 lipopolysaccharide transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 440.0
  • Bit_score: 405
  • Evalue 2.40e-110
  • rbh
Tax=BJP_IG2158_Nitrospirales_45_240 similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 437.0
  • Bit_score: 419
  • Evalue 5.40e-114

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Taxonomy

BJP_IG2158_Nitrospirales_45_240 → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1323
ATGTCGGGCGATGTCGTGATCAGGGCTGAGGGGCTCGGCAAGAAGTACCTCATTCAGCATCAGGAGCGCCAGCGTTACAGCAGGCTCAGCGAGGTTGCGGTGGGAGCGGCGAAATCCGCGTTTCGTTCCGTGCTGTCGGGATTGTCGAGTGCTGAAGCGGCCACTTCGGTCGAGGAATTCTGGGCCCTGAAGGATGTCAGCTTCGAGATTAAATCGGGCGAGGTTGTCGGCATTATCGGGCGCAATGGCGCGGGCAAGTCGACCCTGCTCAAGTTGCTGTCTCGTATCACCGAGCCCACGTCCGGGCGCATTGAAATCAAGGGACGTGTTGCCAGTCTGCTGGAAGTCGGCACCGGATTTCATCCCGAATTGACCGGCCGGGACAATATCTTCCTGAATGGCTCCATCCTTGGCATGTCGCGGGCCGAGATCCGCTCCAAGTTCGATGAGATCGTGGCATTCGCGGAGGTCGAGCGGTTTCTCGATACGCCGATCAAGCGTTATTCAAGCGGCATGTATATGCGGCTTGCTTTCGCGGTGGCGGCACACCTCGAGCCGGAAATCCTCATCGTCGACGAAGTGCTCGCGGTCGGCGATGCCGCCTTTCAAAGGAAGTGCCTCGGCAAGATGGGCGAAGTCGCGCGGCAAGGACGAACCGTATTGTTCGTGAGCCATAATATGAATGCGATCGAGCGCTTGTGCGGCAGGGCCATCGTTCTGCAGCAGGGTTCCGTCAGTCATTTGGGCGATGACGTCAGTGCGGCTATTGCCGTCTATCTCAGGGAGTCTGCGAGACAGGATTCTTCCCAATCCGGGCAACTGTCGTGGCGATCATCAACGGGTCAGGGATCTTCGAAAGTCGATCATATCCGGATTGATGAAATGAGTCTTGATCAGCCTGCCCGTAACACGAGCGAGCATGCGATCGAACTCAGCAACGATTCTCCAATCAGAGTTACGTTGAGCGGTGAAATCATCGAAAGCTCGCCGGCGTTGAACTTGGGAATGGCATTGTATACGTCGGAAGGCGAGCTGTTGTTTTGGAGCTGTACGACGGACTCTGCCGAGGAGTCGTGGCCTTCATCGGCGCCCGGACCGTTCACGCTCCGATGTGAAATTCCGGCGCGGCTTCTCAACGAGGGGGCTTATCGGATCGAGTACATATCCAGCCTTCACTTCCAGCGTTGGGTCCAGGCGCCGAATTCCGGCGGTCCTGCGATCGATTTTCAAATCCGTGGCGGTTTGAGCGATTCGCCGTTGTGGTCTGCGGTGCGCCCCGGTGTGCTGGCTCCTGTTCTTCAATGGATTCGCGATGACCAATAG
PROTEIN sequence
Length: 441
MSGDVVIRAEGLGKKYLIQHQERQRYSRLSEVAVGAAKSAFRSVLSGLSSAEAATSVEEFWALKDVSFEIKSGEVVGIIGRNGAGKSTLLKLLSRITEPTSGRIEIKGRVASLLEVGTGFHPELTGRDNIFLNGSILGMSRAEIRSKFDEIVAFAEVERFLDTPIKRYSSGMYMRLAFAVAAHLEPEILIVDEVLAVGDAAFQRKCLGKMGEVARQGRTVLFVSHNMNAIERLCGRAIVLQQGSVSHLGDDVSAAIAVYLRESARQDSSQSGQLSWRSSTGQGSSKVDHIRIDEMSLDQPARNTSEHAIELSNDSPIRVTLSGEIIESSPALNLGMALYTSEGELLFWSCTTDSAEESWPSSAPGPFTLRCEIPARLLNEGAYRIEYISSLHFQRWVQAPNSGGPAIDFQIRGGLSDSPLWSAVRPGVLAPVLQWIRDDQ*