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SCNpilot_expt_500_p_scaffold_6142_3

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: 3778..4941

Top 3 Functional Annotations

Value Algorithm Source
ribonuclease D; K03684 ribonuclease D [EC:3.1.13.5] similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 379.0
  • Bit_score: 660
  • Evalue 2.80e-187
  • rbh
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 379.0
  • Bit_score: 660
  • Evalue 1.20e-186
ribonuclease D n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034C569A similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 379.0
  • Bit_score: 661
  • Evalue 5.10e-187
  • rbh

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1164
ATGGACCTGATTAAGACCTCGACCGAGCTTGCCGCCGCCTGCGACCGCCTCGCCCGACACCCCACCATCACGGTGGATACCGAATTCCTGCGCGAGACCACCTACTACCCCCTGCTCTGCGTGGTGCAGATGGCGAGCGCCGAGGAGGCCATCGTGGTCGACGCGCTGGCCGAGGGCATCGACCTCGCCCCGTTCTTCGACCTGATGCGCAACGAACAGGTGCTGAAGGTTTTCCACGCCGCGCGGCAGGACATCGAGATCATCTGGAACATGGCCGGCAGTCTGCCGCAACCGGTGTTCGACACCCAAGTCGCGGCCATGGTGCTCGGCTATGGCGACTCCATCGCCTACGACCAGCTCGTCGAGCGGATCACCGGCCATCGCCCCGACAAGACCCACCGCTTCACCGACTGGTCGCGCCGCCCGCTGACGCCGGATCAGGTGACCTATGCGGTTTCCGACGTCACCCACCTGCGCGACGTGTTCGCGGCGCTCGACGCCGACCTGAAGAAACGCGGCCGCAGCGACTGGGTCAGCGAGGAGATGAGGGTCCTGACCTCGCCCGCCACCTACGACGCCAGTCCGGAGCGGGCCTGGGAGCGGCTGAAGACCCGCGTGCGCAAGCCGAAGGAGCTGGCGGTGCTGATGGAGGTCGCGGCCTGGCGCGAGCGCGAGGCGCAGACCCGCGACGTGCCGCGCGGCCGCATCATGAAGGACGACGCGATCGGCGACATCGCCACCCACGCCCCGACCTCGCTGGAGCGCCTCGCGCATCTGCGCTCGCTGCCGAAGGGGTTCGACAAATCGAAATGGGGGCAGGACATCGTCGCCGCCGTGCAGCGCGGCGTCGCCCGCGATCCGGCGACGCTGCCCAAGATCGAGAAGCCGCGCAACAACGGCAACGGTGCCGCGACCGTCGAACTGCTCAAGGTGCTGCTGCGCATGACCTCCGAGCGCCACGCCGTCGCCAGCAAGATCATCGCCACCGTCGACGATCTCGAACAGATCGCGACCAACGATCAGGCCGATGTCGGCGCCCTGCACGGCTGGCGGCGCGAACTGTTCGGCGAATCCGCGCTGGCGCTCAAGCACGGCAAGCTCGCACTGGCGATCGAGAAAGGCCGCGTCGTGCCGGTGACCGGCAAGGACCAGAAGACGGGCTGA
PROTEIN sequence
Length: 388
MDLIKTSTELAAACDRLARHPTITVDTEFLRETTYYPLLCVVQMASAEEAIVVDALAEGIDLAPFFDLMRNEQVLKVFHAARQDIEIIWNMAGSLPQPVFDTQVAAMVLGYGDSIAYDQLVERITGHRPDKTHRFTDWSRRPLTPDQVTYAVSDVTHLRDVFAALDADLKKRGRSDWVSEEMRVLTSPATYDASPERAWERLKTRVRKPKELAVLMEVAAWREREAQTRDVPRGRIMKDDAIGDIATHAPTSLERLAHLRSLPKGFDKSKWGQDIVAAVQRGVARDPATLPKIEKPRNNGNGAATVELLKVLLRMTSERHAVASKIIATVDDLEQIATNDQADVGALHGWRRELFGESALALKHGKLALAIEKGRVVPVTGKDQKTG*