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SCNpilot_expt_500_p_scaffold_6908_4

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: comp(3430..4404)

Top 3 Functional Annotations

Value Algorithm Source
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 298.0
  • Bit_score: 455
  • Evalue 1.50e-125
  • rbh
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 308.0
  • Bit_score: 455
  • Evalue 5.00e-125
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Afipia birgiae RepID=UPI0002E8082D similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 323.0
  • Bit_score: 457
  • Evalue 9.40e-126
  • rbh

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 975
GTGAGCCAGGGCCAGGACAATGCGAAGGCTGTGCTTATCGCAGGGCCGACCGCCAGCGGCAAGTCGGCGCTGGCCCTCGCCTTGGCCGAGGCGACCGGCGGCGTGATCATCAACACCGATTCGATGCAGGTCTATCGCGATTTGCGCGTCATCACCGCGCGGCCGACGCCGCAGGAGGAGGGGCGGGCGCCGCATCGCCTTTATGGCACCGTCGATGCCGCGGTGAATTTCTCCGCCGGCGCCTGGGTCGCGGCCGCAGCCGCGGAACTGGCGCAGGTGCGGGCCGCCGGCCGGTTGCCGATCTTCATCGGCGGCTCGGGGCTGTACTTCAAGGCTCTGACGCGGGGCCTGTCGAACGTGCCGCCGGTGCCTGCCGACATTCGCGAAGCGGTGCGAGCCCGCTTGGAGCGCGACGGGGTCGAGGCGCTGCATGCCGAGCTGGCCCGGCGCGATCCGGAAGCCGGCCAGCGGCTCAAACCTCGCGACCGCACCCGTATCGCCCGCGCGCTCGAGGTGGTGGAGGCGACCGGGCGGACGCTGGCCGACTGGCACGGTGAGGGCCTGCCGCCGTTGTTGTCGGCGGACAACGTGATCGCGGTGTTTCTCGCGCCGGATCGCGAGGAGCTTTATGCGCGCATCGACCGGCGCTTCACCGATATGCTCACGGGCGGCGCGCTGGAGGAGGTGGAGGCGCTGGCGGCCCGCGGGCTCGATCCGCTGCTGCCGGCGATGAAGGCCCATGGCGTGCCGGCGCTGATCCGCCATCTGCGCGGCGAGATCACGCGGGAGGAAGCGGCCCGGATCGGCCAGCTCGACACCCGGCACTACGCCAAGCGGCAGTTCACCTGGTTCCGACACCAGCTTGCGGAGTTCGCCTGGGTGCCGCCCGCCGAGGCGCAGGCGCGGCTCTCTTATGCGGTTTCGCGCTCTCTGGGGGATGCGGAAGGGGCTAGTCTCGGCTCGCTGCGGGCTTGA
PROTEIN sequence
Length: 325
VSQGQDNAKAVLIAGPTASGKSALALALAEATGGVIINTDSMQVYRDLRVITARPTPQEEGRAPHRLYGTVDAAVNFSAGAWVAAAAAELAQVRAAGRLPIFIGGSGLYFKALTRGLSNVPPVPADIREAVRARLERDGVEALHAELARRDPEAGQRLKPRDRTRIARALEVVEATGRTLADWHGEGLPPLLSADNVIAVFLAPDREELYARIDRRFTDMLTGGALEEVEALAARGLDPLLPAMKAHGVPALIRHLRGEITREEAARIGQLDTRHYAKRQFTWFRHQLAEFAWVPPAEAQARLSYAVSRSLGDAEGASLGSLRA*