ggKbase home page

SCNpilot_expt_500_p_scaffold_8102_3

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: comp(965..2167)

Top 3 Functional Annotations

Value Algorithm Source
Flagellar motor switch protein FliM n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2D9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 400.0
  • Bit_score: 740
  • Evalue 9.00e-211
  • rbh
Flagellar motor switch protein FliM {ECO:0000256|PIRNR:PIRNR002888}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 400.0
  • Bit_score: 740
  • Evalue 1.30e-210
fliM; flagellar motor switch protein FliM; K02416 flagellar motor switch protein FliM similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 395.0
  • Bit_score: 727
  • Evalue 3.20e-207
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
ATGACACCCGGTGATGACGTCGATCAGGATGCACTGGCCGCCCAATGGGAGGGCGCGCTCGACTCCGAGGATCCCGAAGAGGCGGCAGCCGAAGCCGCCAGTAATGAACTCACCGAAACCATGGCCGAGCAGTGGGCCGCCATGGTGGACGATGGCAGCCGCGGTCTCGCCTCGGCCAAGGCCAACGGTGAGCGGGTGCTGTCGCAGGAAGAAATCGACAACCTGCTCGGCTTCAGCGACGGCGAAGTCCATCTCGAGGATCATTCCGGTATTCGCGCTATCATCGACTCGGCGATGGTGTCCTACGAGCGTCTGCCGATGCTCGAAATCATCTTCGACCGCCTGGTGCGGTTGATGACGACGAGCCTGCGCAATTTCACCTCCGACAACGTCGAAGTCTCGCTCGACCGCATTACCTCGGTGCGCTTTGCCGATTATCTGAATTCGATCCCGCTGCCCTGCGTGCTGACGGTGTTCAAGGCCGAGGAGTGGCAGAATTTCGGGCTGTTCACGGTCGATTCCAGCCTGATCTATTCGATGATCGACGTGCTGCTCGGCGGGCGGCGCGGCCAGACCTCGCTGCGCATCGAAGGCCGGCCCTACACCACGATCGAGACCAATCTCGTCAAGCGCCTCGTCGAAGTGGTGCTGGCCGATGCCGAGCAGGCGTTCCGTCCGCTGTCGCCGGTGACCTTTACCATCGACCGGCTGGAGACCAATCCGCGCTTTGCCGCGATCAGCCGTCCCGCCAATGCCGCGATCCTGGTGCGCCTGCGCATCGACATGGAAGATCGCGGCGGCAATGTCGAGCTTCTGCTGCCCTACGCGACGATCGAGCCGATCCGCGGCGTGCTGCTGCAGATGTTCATGGGCGAAAAGTTCGGCCGTGACCCGATCTGGGAAGGCCATTTCGCCACCGAGATCGTGCAGGCCGAAATCGCCGTCGATGCGGTGCTCTATGAAGCCGATATGCCGCTCAAGCAGTTGATGAGCCTCAAGGTCGGCGACACCCTGCCGCTCGACATCCGCCCCGACGCGCTGGTGTCGGTGCGCTGCGGCGACGTCACTTTAAGCGAGGGCCGGATGGGGCGGGTCGGCGACAAGGTTGCCATTCGCGTCACCAAGCCGTTGCGCAAACCGCACACCACCTACGCCATGTTCGAAAAGGCCGACGAACAAACAAAGATGATGGAGGCACAATGA
PROTEIN sequence
Length: 401
MTPGDDVDQDALAAQWEGALDSEDPEEAAAEAASNELTETMAEQWAAMVDDGSRGLASAKANGERVLSQEEIDNLLGFSDGEVHLEDHSGIRAIIDSAMVSYERLPMLEIIFDRLVRLMTTSLRNFTSDNVEVSLDRITSVRFADYLNSIPLPCVLTVFKAEEWQNFGLFTVDSSLIYSMIDVLLGGRRGQTSLRIEGRPYTTIETNLVKRLVEVVLADAEQAFRPLSPVTFTIDRLETNPRFAAISRPANAAILVRLRIDMEDRGGNVELLLPYATIEPIRGVLLQMFMGEKFGRDPIWEGHFATEIVQAEIAVDAVLYEADMPLKQLMSLKVGDTLPLDIRPDALVSVRCGDVTLSEGRMGRVGDKVAIRVTKPLRKPHTTYAMFEKADEQTKMMEAQ*