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SCNpilot_expt_500_p_scaffold_8646_1

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: comp(38..1675)

Top 3 Functional Annotations

Value Algorithm Source
Lysine-tRNA ligase {ECO:0000313|EMBL:AEI07956.1}; EC=6.1.1.6 {ECO:0000313|EMBL:AEI07956.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.8
  • Coverage: 539.0
  • Bit_score: 1025
  • Evalue 0.0
lysK; lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 539.0
  • Bit_score: 1025
  • Evalue 0.0
  • rbh
Lysine--tRNA ligase n=2 Tax=Oligotropha carboxidovorans RepID=B6JD98_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 539.0
  • Bit_score: 1025
  • Evalue 0.0
  • rbh

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1638
ATGCCAAACGAACTTCCCGTCAGCGCGAGCGATCTGCGCGCGGTCGCCGAACAATCCAACGCCTGGCCGTTCGAACAGGCGAAGCAGATCGTGGCGCGGCTGAAGACCAGGCCGAAGGACGAGGTGCTGTTCGAAACCGGCTACGGCCCCTCAGGTCTGCCGCATATCGGCACTTTCGGCGAGGTCGCGCGCACCACCATGGTGCGCCATGCCTTCCGGGTGCTGACCGAGGACAAGGTCAGGACCCGGCTGCTCGCCTTCTCCGACGACATGGACGGCCTGCGCAAGGTGCCGGACAACGTGCCCAACAAGGAGCTGCTGGCGCAGGATCTCGGCAAGCCGCTGACCCGCGTGCGCGATCCGTTCGGCACCCATGACAGCTTCGGCGCGCACAACAACGCGCGGCTGCGCGCCTTCCTCGACACCTTCGGTTTCGATTACGAATTCGCATCCTCGACCGACTACTACACCTCGGGCCGGTTCGACGCGACGCTGCTCAAGGTGCTGGAGAAGATCGAGGAGGTGATGGCGATCATGCTGCCCTCGCTGCGCGAGGAGCGCGCCGCGAGCTATTCGCCGTTTCTGCCGGTCTGTCCGCGCACCGGCGTGGTGCTGCAGGTGCCGATCGTCGAGCACGACAAGAAGGCCGGCACCGTGTCGTACGACGATCCGGAGACGAAGGAGCGCGTCACCGTTCCTGTCACCGGCGGCCACTGCAAGCTGCAATGGAAGCCGGACTGGGCGATGCGCTGGGTCGCGCTCGGCGTCGATTACGAAATGGCCGGCAAGGATCTGATCGATTCGGTGAAGCTGTCGGGCAAGATCTGCCGTGCGCTCGGCGGCACGCCGCCGGAAGGCTTCAACTACGAACTGTTCCTCGACGACAAGGGCCAGAAGATTTCCAAGTCGAAGGGCAACGGTCTCACCATCGACGAGTGGCTGCGCTACGCCTCGCCGGAATCGCTGTCGCTGTTCATGTATCGCGAACCGAAATCCGCCAAGCGGCTGTATTTCGACGTGATCCCGCGCAATGTCGATGAGTATCAGCAGTTCCTCGACGGCTATGCGCGCCAGGACATCAAGCAGCGGCTCGGCAATCCGGTGTGGCACATCCATGCCGGCAACCCGCAGGCCTCCGAGATGCCGGTGACGTTCCAGTTGTTGCTGACGCTGGTGTCGTCGTCCAATGCCGAGAACGCCGAGACGCTGTGGGGTTTCATCCAGCGCTATCGCCCCGGCGTGACGCCGCAGTCTCATCCGCGGCTCGACGCGCTGGTTGGTTATGCGATCAATTACTATCGCGACTTCGTGGCGCCGACCAAGCAGTTCCGCGCCCCGACCGACAGCGAGCGCGCGGCGCTGACCGACCTGCGCAACGCGCTGGCGCAACTGCCGCCGGAGGCGTCCGCCGAGGACATCCAGAACGTGGTCTACGAGATCGGCCGGCGCGAGCCGTTCCTCGATCACAAGAAGGCCGGCAAGGATGGCCGGCCCGGCGTTGCGCTCGACTGGTTCAACATGCTCTATCAGGTGCTGCTCGGACAGGAGAAAGGTCCGCGCTTCGGCTCGTTCGTCGCGGTCTACGGCGTGACCAACGCCATCGCGATGATCGACGCCGCGCTGACGCGCAGCGCCTGA
PROTEIN sequence
Length: 546
MPNELPVSASDLRAVAEQSNAWPFEQAKQIVARLKTRPKDEVLFETGYGPSGLPHIGTFGEVARTTMVRHAFRVLTEDKVRTRLLAFSDDMDGLRKVPDNVPNKELLAQDLGKPLTRVRDPFGTHDSFGAHNNARLRAFLDTFGFDYEFASSTDYYTSGRFDATLLKVLEKIEEVMAIMLPSLREERAASYSPFLPVCPRTGVVLQVPIVEHDKKAGTVSYDDPETKERVTVPVTGGHCKLQWKPDWAMRWVALGVDYEMAGKDLIDSVKLSGKICRALGGTPPEGFNYELFLDDKGQKISKSKGNGLTIDEWLRYASPESLSLFMYREPKSAKRLYFDVIPRNVDEYQQFLDGYARQDIKQRLGNPVWHIHAGNPQASEMPVTFQLLLTLVSSSNAENAETLWGFIQRYRPGVTPQSHPRLDALVGYAINYYRDFVAPTKQFRAPTDSERAALTDLRNALAQLPPEASAEDIQNVVYEIGRREPFLDHKKAGKDGRPGVALDWFNMLYQVLLGQEKGPRFGSFVAVYGVTNAIAMIDAALTRSA*