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SCNpilot_expt_500_p_scaffold_8703_2

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: comp(2785..3225)

Top 3 Functional Annotations

Value Algorithm Source
PRC-barrel n=1 Tax=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) RepID=B6JFA4_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 146.0
  • Bit_score: 211
  • Evalue 5.30e-52
PRC-barrel protein similarity KEGG
DB: KEGG
  • Identity: 71.9
  • Coverage: 146.0
  • Bit_score: 211
  • Evalue 1.70e-52
PRC-barrel domain protein {ECO:0000313|EMBL:CEG08023.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 146.0
  • Bit_score: 210
  • Evalue 2.20e-51

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGAAGAAATCGATGATGATCGGCCTGTCGCTGGCGATGCTTGCTGCTCCTGCCTTCGCTCAATCGACGATGACGCCGTCCGGCAGCGCCGGAAGTACCGCCGCGCCCGCACCGACTGTCGGCACCGCACCGGCCACGCCGCGCTTCGCGACGGTGTCCCGCGACGAGATGTTCTCCTCGAAGCTGAAGGGCCTCAACGTCTATAACGAGAAGGACGAGTCGATCGGTGAAATCTCCGACCTCGCCATCAGCAAGAACGATCAGGTTCAGGCGCTGATCCTGTCGGTCGGCGGTTTCCTCGGCATGGGGGAGCGCTATGTCGCAGTCGCGCCCTCGGCGGTGAACGTGACCTATGATGCGTCGAGCAAGAAGTGGCGCGCCACCATGAACACCACCAAGGAAGAACTGAAGTCGGCGCCGGAATTCAAATATCCGCAGTAA
PROTEIN sequence
Length: 147
MKKSMMIGLSLAMLAAPAFAQSTMTPSGSAGSTAAPAPTVGTAPATPRFATVSRDEMFSSKLKGLNVYNEKDESIGEISDLAISKNDQVQALILSVGGFLGMGERYVAVAPSAVNVTYDASSKKWRATMNTTKEELKSAPEFKYPQ*