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SCNpilot_expt_500_p_scaffold_12574_4

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: comp(2753..3499)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 247.0
  • Bit_score: 380
  • Evalue 2.10e-102
16S ribosomal RNA methyltransferase RsmE; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 247.0
  • Bit_score: 366
  • Evalue 9.00e-99
  • rbh
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IKQ2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 247.0
  • Bit_score: 380
  • Evalue 1.50e-102
  • rbh

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Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGCCCACGCACGATTTCCGCAGCCCCCGCCTGTTTGTCGACGCGCCGCTCGCTGACGGCGCAACCCTCGCGCTCGACCGCGCCCAGGCCAATTATCTCGGCAACGTGCTGCGGCTCGGCGCGGGTGATCCCGTGCTGGTGTTCAACGGCCGGGACGGCGAATGGCGCGCCGACATTTCCGGGCGCAAACGGCCCGATCAACTGATTCTCACCGCCCAAAGCCGGCCGCAGGACCGTCTGCCCGATTTGCATCTGGTGTTCGCCCCGCTCAAGCATGCGCGGCTCGATTACATGGCGCAGAAGGCGGTGGAGATGGGCGCGAGCGCCCTGCAGCCGGTGATCACACGGTTTACTCAGATCAGCCGCCTCAACGCCGAGCGGATGCGCGCCAACGTCATCGAGGCCGCCGAGCAATGCGGCATTCTCAGCCTTGCGGCGGTGGAAGATCCGGTGCCGCTGGAGCGCTATCTCGCCGCCCGCGACCCGCAGCGCCTGCTGGTGTTCTGCGACGAGGCCGCCGAGGTGGCCGATCCGGCGGCCGCCCTGGCCGACGCCTCGCTATCCTCCGGCATCGACGTGCTGATCGGCCCCGAAGGCGGCTTTGCCGAGGAGGAGCGCGCCGCCCTGCTCAGGCAGCCCCGGACCGTCCGGCTCGCGCTCGGCCCCCGCATCCTGCGTGCCGATACCGCCGCCGTGGCGGCGCTGGCGGTGGTCCAGACCGTGCTGGGCGATTGGGGCAAACCCTGA
PROTEIN sequence
Length: 249
MPTHDFRSPRLFVDAPLADGATLALDRAQANYLGNVLRLGAGDPVLVFNGRDGEWRADISGRKRPDQLILTAQSRPQDRLPDLHLVFAPLKHARLDYMAQKAVEMGASALQPVITRFTQISRLNAERMRANVIEAAEQCGILSLAAVEDPVPLERYLAARDPQRLLVFCDEAAEVADPAAALADASLSSGIDVLIGPEGGFAEEERAALLRQPRTVRLALGPRILRADTAAVAALAVVQTVLGDWGKP*