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SCNpilot_expt_500_p_scaffold_18817_2

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: comp(366..728)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L18 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PCM5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 120.0
  • Bit_score: 223
  • Evalue 8.50e-56
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 120.0
  • Bit_score: 223
  • Evalue 1.20e-55
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 similarity KEGG
DB: KEGG
  • Identity: 95.0
  • Coverage: 120.0
  • Bit_score: 221
  • Evalue 1.30e-55

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 363
ATGTCGAAACTCAAGGTCACGAATGCCCGGCGCAAGCAGCGCGTGCGTCTGGCGCTGCGCCGTACGGCCAACGGCCGTCCGCGTCTGTCGGTGTTCCGTTCGTCGAAGCACATCTATGCCCAGGTCATCGACGACCAGAAGGGCGAAACCCTGGCTGCCGCCTCGTCGCTGGAGAAGACCATGCGCGATGCCGGCAAGACCGGCGCCAACATCGATGCGGCGAAGGCTGTCGGCAAGCTGCTGGCCGAGCGCGCGGTGAAGAACGGTGTCAAGGAAGTTATTTTCGACCGTGGCGGCTATCTCTATCACGGCCGCGTCAAGGCGCTCGCCGATGCGGCCCGCGAGAGCGGGTTGAGCTTCTAA
PROTEIN sequence
Length: 121
MSKLKVTNARRKQRVRLALRRTANGRPRLSVFRSSKHIYAQVIDDQKGETLAAASSLEKTMRDAGKTGANIDAAKAVGKLLAERAVKNGVKEVIFDRGGYLYHGRVKALADAARESGLSF*