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SCNpilot_expt_500_p_scaffold_20528_3

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: 927..2231

Top 3 Functional Annotations

Value Algorithm Source
Fmu (Sun); K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 431.0
  • Bit_score: 702
  • Evalue 9.30e-200
  • rbh
MFS transporter n=1 Tax=Afipia birgiae RepID=UPI0002D491AB similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 431.0
  • Bit_score: 720
  • Evalue 8.00e-205
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS39536.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 433.0
  • Bit_score: 718
  • Evalue 7.30e-204

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1305
ATGACGCCCGCCGCACGGCTGTCCGCAGCCATCGAAGTCCTTGCAGCCATCGACGCCCAGCGGATTCCCGCCCAGAACGCGCTCAAGGAATGGGGCACCGCGCATCGCTTTGCCGGCTCGGGCGACCGTGCGGCCATCGCGGGTCTGGTGTTCGACGTTCTGCGCCGCAAGGCGTCGAGCGCCTATCTTCTGGATAGCGATACGCCGCGCGCACGCCTGCTCGGCATGCTGAAGCTCGAACGTGGGTTGGACGTCGATGCGATTGCGGCATTGTGCGACGGCGGGCGCTTTGCGCCGGAGCCCTTGACCGACGCGGAGCGGCAGGCGCTCACCTCGCGCTCGCTGCTGGATGCGCCGGCTCATGTCGCGGGCGATTATCCGGAATGGCTCGATCCGCATCTGGCCAGCGTGTTCGGCGATGACCGCGCGATGGAAGCCGCCGCGATGGCGAGCCGCGCGCCGCTCGATCTGCGCGTCAATACGCTCAAGGCCAAGCGCGAGAAGGCTCTGGCCTCGCTGGCGCATCTTGGCGCGCAGCCGACGCCGTGGTCGCCGCTCGGCCTGCGTATTGCGCTCGGCGCTGACGCGCGCAATCCCGGCATCCATGCCGAGGAGAATTTCATCAAGGGCGGCATCGAGGTGCAGGACGAGGGTTCGCAGATCGCGGCGCTGCTCACCGCCGCGCGTCCCGGCGAGCAGGTCATCGATATGTGCGCAGGCGCCGGCGGCAAGACGCTGGCGCTGGCGGCGATGATGCAGGGCAGGGGCCGGCTGATCGCGACCGACCGCGACAAGCGTCAGCTTGCGCCGATCCATGAGCGGCTGTCGCGGGCCGGCGTTCACAACGCCGATGTCCGCGCCCCGAAGGGGCCGGACGACACGTTGGGCGATATCCGCGCCAGCGCCGATCTGGTGGTGATCGATGCGCCGTGCACCGGCACCGGCACCTGGCGGCGCAATCCGGACGCCAAATGGCGGATGCGGCCGGGCGCGCTGGAGATCCGTGTCAGGGACCAGGTCGAGGTGCTGGAGCGCGCCGCGCCGCTGGTGAAGCCCGGCGGGCGGATCGGTTACATCACCTGCTCGGTGCTGGGCCAGGAGAATTCCGCGCAGGTGGCGGATTTCCTCAAGCGTCACCCCGAATTCGCGGTGGTGCCGCCGAAAGAGGTGGTAGGCGCGCTGGGCGAGCGCGGAGCGGAGTTTGCCGCTAGCGCGTTGCTGTCGCCCGAGGGCCTGTTGATGACCCCGCGGCGGACCGGGACCGACGGGTTTTTTGTCTCGATCCTGCGGCGGCAGACGGCCTGA
PROTEIN sequence
Length: 435
MTPAARLSAAIEVLAAIDAQRIPAQNALKEWGTAHRFAGSGDRAAIAGLVFDVLRRKASSAYLLDSDTPRARLLGMLKLERGLDVDAIAALCDGGRFAPEPLTDAERQALTSRSLLDAPAHVAGDYPEWLDPHLASVFGDDRAMEAAAMASRAPLDLRVNTLKAKREKALASLAHLGAQPTPWSPLGLRIALGADARNPGIHAEENFIKGGIEVQDEGSQIAALLTAARPGEQVIDMCAGAGGKTLALAAMMQGRGRLIATDRDKRQLAPIHERLSRAGVHNADVRAPKGPDDTLGDIRASADLVVIDAPCTGTGTWRRNPDAKWRMRPGALEIRVRDQVEVLERAAPLVKPGGRIGYITCSVLGQENSAQVADFLKRHPEFAVVPPKEVVGALGERGAEFAASALLSPEGLLMTPRRTGTDGFFVSILRRQTA*