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SCNpilot_expt_500_p_scaffold_20113_1

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: 144..635

Top 3 Functional Annotations

Value Algorithm Source
Single-stranded DNA-binding protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6R7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 163.0
  • Bit_score: 284
  • Evalue 9.40e-74
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 163.0
  • Bit_score: 284
  • Evalue 1.30e-73
ssb1; ssDNA-binding protein; K03111 single-strand DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 163.0
  • Bit_score: 277
  • Evalue 2.10e-72

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGGCGGGAAGCGTCAACAAGGTGATTTTGGTCGGCAACCTCGGCGCCGACCCCGACATGCGCCGCACCCAGGACGGTCGTCCGATCGCTAATCTCAGTGTCGCGACCTCGGAGAGCTGGCGCGACAAGAACACCGGCGAGCGCAAGGAAAAGACCGAGTGGCATCGCGTGGTGATCTTCAATGAAGGGTTGTGCCGGATCGCGGAGCAATATCTGAAGAAGGGCTCCAAGGTTTACATCGAGGGCGCACTGCAGACCCGCAAATGGCAGGACAAGGACGGCAAGGACAAGTATTCGACCGAAGTGGTGCTGCAGGGCTTCAATTCGGTGCTCACCATGCTGGACGGCCGTAGCGGCGGTGGCGGCGGATCGTTCGCGTCGGACGACACGGGCGGCGATTTCGTCTCCGGCGGCGGCTCGCAGCGCCGGTCGGTGTCGTCGGGCGGCGGCGGTGGCCGCAACGACGATATGAACGACGACATTCCGTTCTAA
PROTEIN sequence
Length: 164
MAGSVNKVILVGNLGADPDMRRTQDGRPIANLSVATSESWRDKNTGERKEKTEWHRVVIFNEGLCRIAEQYLKKGSKVYIEGALQTRKWQDKDGKDKYSTEVVLQGFNSVLTMLDGRSGGGGGSFASDDTGGDFVSGGGSQRRSVSSGGGGGRNDDMNDDIPF*