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SCNpilot_expt_500_p_scaffold_20168_3

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: comp(1369..1833)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=2 Tax=Oligotropha carboxidovorans RepID=RL13_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 154.0
  • Bit_score: 299
  • Evalue 2.00e-78
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 154.0
  • Bit_score: 299
  • Evalue 6.40e-79
50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 154.0
  • Bit_score: 299
  • Evalue 2.90e-78

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGAAGACGTTTTCGGCCAAACCAGCCGAGGTCAACAAGAAGTGGGTGCTGATCGACGCCAAGGGTCTGGTCGTCGGCCGCCTCGCTACGTTGGTCGCGATGCGTTTGCGCGGCAAGCACCTGCCGACCTACACCCCGCATGTCGATTGCGGTGACAATGTTATCATTATCAATGCCGCGCAGGTCGTTCTCACCGGCCGCAAGCGCGATGACAAGATGTACTACAAGCACACCGGTTTCATCGGTGGCATCAAGGAGCGCAGCGCGAAGTCGATCCTCGAGGGTCGCTTCCCCGAGCGCGTGATCGAGAAGGCCATCGAGCGCATGATCCCGCGTGGGCCGCTCGGCCGCATGCAGATGGGCAACCTGCGCGTTTACGCCGGCGTCGAGCATCCGCACGAAGCGCAGCAGCCTGAAGTTATCGATATCGCATCGCTGAACCGCAAGAACACGAGGGCGGCATAA
PROTEIN sequence
Length: 155
MKTFSAKPAEVNKKWVLIDAKGLVVGRLATLVAMRLRGKHLPTYTPHVDCGDNVIIINAAQVVLTGRKRDDKMYYKHTGFIGGIKERSAKSILEGRFPERVIEKAIERMIPRGPLGRMQMGNLRVYAGVEHPHEAQQPEVIDIASLNRKNTRAA*