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SCNpilot_expt_500_p_scaffold_20823_2

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: comp(1588..2472)

Top 3 Functional Annotations

Value Algorithm Source
ABC-2 type transporter n=1 Tax=Afipia sp. 1NLS2 RepID=D6V3X6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 295.0
  • Bit_score: 454
  • Evalue 7.30e-125
  • rbh
ABC-2 type transporter {ECO:0000313|EMBL:EFI52656.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 295.0
  • Bit_score: 454
  • Evalue 1.00e-124
ABC transporter permease; K09686 antibiotic transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 72.5
  • Coverage: 295.0
  • Bit_score: 421
  • Evalue 1.60e-115
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
GTCCTGATCGCGGAATCGGACAGTCAGGCCCTGATGGATGCCGGAAAGCATACCTTCGTGCTCGATATTCCTCCGAATTTCGAGCGCGATGTGCTGGCCCGGCGCCAGCCGAAATTGCAGCTCAATGTGGATGCGACCGCGATGGTGCAGGCCGGATTGGGATCGGGCTACGCGCAACAGATCATCGGCACCACCATCGCGCAATTTCTGTCGCGCGACGAATCGGTTCCCACCCCTGCCGTCGATCTTGTGACAAGGGTGGCGTTCAATCCGAACGTAACCACATCCTGGTTCACCAGCGTCATGAGCATCATCGGCAGCGTGAACATGCTGGCGATCATTCTCGCCGGTGCGGCCCTCGTTAGGGAGCACGAGCACGGCACGATGGATCATCTCATAGTGATGCCGCTCACGCCGTTCGAGATCGCCATGGCGAAGATCTGGGCCAACAGTCTGGTGATCACGGTCGCAGTCGGCATATCGCTTTACGTTGTCGTTCGCATGCTTTTGAAAGTGCCGCTGGCCGGCTCGATCCCGCTCTTCCTGTTTGGCACGCTCATCTATTTGTTCTTCGCGACCGGGCTCGGCCTGTTCCTGGGCACTATCGCGCGAACCATGCCGCAACTGGGTCTGCTCTATGTGCTGGTCGCGACGCCGATGAACATTCTTTCCGGCGCGGCGACGCCGCTGGAGAGCATGCCCCGATGGCTCGCCATCACCATGCAGGCTTCGCCGTCGACCCATTTCGTCTCGTTCGCGCAGGCCATTCTGTTTCGCGGCGCCGGTCTCGACGTGGTCTGGCCGCAATTTCTGGCGGTGACGGGAATCGGCGCGCTGTTTTTGGCGCTCTCGCTGCTGCGATTCCGGGCGACCGCATCCGCTTAG
PROTEIN sequence
Length: 295
VLIAESDSQALMDAGKHTFVLDIPPNFERDVLARRQPKLQLNVDATAMVQAGLGSGYAQQIIGTTIAQFLSRDESVPTPAVDLVTRVAFNPNVTTSWFTSVMSIIGSVNMLAIILAGAALVREHEHGTMDHLIVMPLTPFEIAMAKIWANSLVITVAVGISLYVVVRMLLKVPLAGSIPLFLFGTLIYLFFATGLGLFLGTIARTMPQLGLLYVLVATPMNILSGAATPLESMPRWLAITMQASPSTHFVSFAQAILFRGAGLDVVWPQFLAVTGIGALFLALSLLRFRATASA*