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SCNpilot_expt_500_p_scaffold_21716_1

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: 2..199

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 65.0
  • Bit_score: 118
  • Evalue 3.90e-24
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7I3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 65.0
  • Bit_score: 118
  • Evalue 2.80e-24
hypothetical protein; K07115 similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 64.0
  • Bit_score: 110
  • Evalue 2.40e-22

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 198
GGCGAGGATCGCTGCCTGCGGATCGAGTTCAGCGTCGCGCCGCAGACCGCTCAGTCGGGGCTGATGTCGGCGGGGCTGCTGGTGGTCAATCCGCCCTGGACGCTGGCGTCGGATCTCAAGACCATTCTGCCCGAGCTTGAGAAGCCGCTCGGACTGGGCGGCGCCGGCCGCTATCGCCTCGAGGTCTGCCGGCCCTAG
PROTEIN sequence
Length: 66
GEDRCLRIEFSVAPQTAQSGLMSAGLLVVNPPWTLASDLKTILPELEKPLGLGGAGRYRLEVCRP*