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SCNpilot_expt_500_p_scaffold_21716_2

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: 331..546

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7I4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 71.0
  • Bit_score: 137
  • Evalue 4.80e-30
cold-shock' DNA-binding domain; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 71.0
  • Bit_score: 137
  • Evalue 2.00e-30
Uncharacterized protein {ECO:0000313|EMBL:CEG09319.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 71.0
  • Bit_score: 137
  • Evalue 6.70e-30

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 216
ATGCCGATGAGCGGGACGGTGAAGTTCTTTAATGCCGAGCGAGGTTACGGTTTCATCAAGCCGGACGATGGCGGGCGCGATGTCTTCGTTCACATCACGGCGGTCGAACGGGCGGGATTGAAAAATCTGGTCGAGGGCCAGCACATCACGTTCGAGGTCGAGCCTGACAAAAAGGGCAAGGGCCCGAAGGCCGTCGATCTCGTCGTCACATCCTGA
PROTEIN sequence
Length: 72
MPMSGTVKFFNAERGYGFIKPDDGGRDVFVHITAVERAGLKNLVEGQHITFEVEPDKKGKGPKAVDLVVTS*