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SCNpilot_expt_500_p_scaffold_23355_3

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: 1319..2233

Top 3 Functional Annotations

Value Algorithm Source
Histone deacetylase superfamily n=1 Tax=Afipia sp. 1NLS2 RepID=D6V9C2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 305.0
  • Bit_score: 571
  • Evalue 7.20e-160
  • rbh
Histone deacetylase superfamily {ECO:0000313|EMBL:EFI50760.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 305.0
  • Bit_score: 571
  • Evalue 1.00e-159
histone deacetylase family protein similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 305.0
  • Bit_score: 569
  • Evalue 8.60e-160
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGTCGACCCTGTTGCTGACTCACACCGCCGCCTCGCTCAACCATCGTACGCCCGAAGGTCACCCCGAGCGACCCGACCGTATTCGCGCCATGAACAAGGCGCTCAGCCTCGAGGTGTTCAACGATCTGATCCGCGAGGAAGCGCCGATCGGCGATCTGGAAACCGTCAAGCTGTGCCACGACGAAGCCTATGTCGAGGAAATCCGCGAGATGGCGCCGAAAGAGGGCATCGTCCATCTCGACGGCGACACCGCGATGTCGCCCGGCTCCTGGGAGGCGATCATGCGCGGCGTCGGCGGCGCCAATGCCGGCGTCGATGCGGTGGTCAGCGGCAAGGCGCAGAACGTGTTCGTCGGCATGCGGCCCTGCGGCCATCACGCCGAGCGCGCCCGCGCGATGGGCTTCTGCTTCTTCGATCAGGCGGCGGTCGCCGCGCGCTACGCGCAGAAGAAGCACGGCATCGGCCGCGTCGCGGTGGTCGATTTCGACGTGCATCACGGCAACGGCTCGCAGGACATCTTCTGGGCCGACCCGACCGTGATGTATTGCTCGACCCACCAGATGCCGCTGTTTCCCGGCACCGGCGCCTCGCAGGAGCGCGGTGAGCACGACACCATCGTCAACGCCCCGCTCGCGCCCGGCGACGGCGGCCCGAAATTCCGCCAGGCCTTCGAGGGCGTGATCCTGCCGCAACTGCGCAAGTTCTCGCCCGAACTGATCATCATCTCGGCCGGCTTCGACGCGCACTGGCGCGATCCGCTGGCCAACATCAAGCTCGACGAGAAGGATTTCGGCTGGGTCACCCGGCAGTTGATGGACGTCGCCGACGCCTCGGCGGGCGGGCGCATCGTCTCGGTGCTGGAAGGCGGCTACGATCTGCAGGGCCTGCATGATTCGGTGGTCGAGCACGTCACC
PROTEIN sequence
Length: 305
MSTLLLTHTAASLNHRTPEGHPERPDRIRAMNKALSLEVFNDLIREEAPIGDLETVKLCHDEAYVEEIREMAPKEGIVHLDGDTAMSPGSWEAIMRGVGGANAGVDAVVSGKAQNVFVGMRPCGHHAERARAMGFCFFDQAAVAARYAQKKHGIGRVAVVDFDVHHGNGSQDIFWADPTVMYCSTHQMPLFPGTGASQERGEHDTIVNAPLAPGDGGPKFRQAFEGVILPQLRKFSPELIIISAGFDAHWRDPLANIKLDEKDFGWVTRQLMDVADASAGGRIVSVLEGGYDLQGLHDSVVEHVT