ggKbase home page

SCNpilot_expt_500_p_scaffold_24748_3

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: 1367..1807

Top 3 Functional Annotations

Value Algorithm Source
biopolymer transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F643BA similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 144.0
  • Bit_score: 210
  • Evalue 1.20e-51
Bradyrhizobium elkanii strain UASWS1015 Contig185, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44908.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 146.0
  • Bit_score: 212
  • Evalue 3.40e-52
biopolymer transport protein ExbD/TolR; K03560 biopolymer transport protein TolR similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 141.0
  • Bit_score: 208
  • Evalue 1.40e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium elkanii → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGGGCGCAAGGCTCGGCGGCAATCTTTCCACCACGCCGGACGATCTCGCGGTCACACACGAGATCAACGTCACGCCGTTCATCGATGTGATCCTGGTGCTGCTGATCATCTTCATGGTGGCGGCGCCGCTCGCCACCGTCGATATCGGCGTCGACCTGCCGGCCTCCACCGCGCAGCAGCAGCCGCGTCCCGACAAGCCGATCTTCGTCACCGTCAAGCCTGATCTGTCGCTCGCGGTCGGCGAGGACACCGTTGCCCGCGACGCGCTGAAAAGCACGCTCGACACCCTCACCGAGGGCAAGACCGATCAGCGCATTTTCGTGCGCGCCGACAAGACGATCAGCTATGGCGACCTGATGGAGACGATGAATCTCCTGCGCAACGCCGGCTATCTCAAGATCGCGCTGGTCGGGCTCGAGGCGCCGGGCGAGAGCAAATGA
PROTEIN sequence
Length: 147
MGARLGGNLSTTPDDLAVTHEINVTPFIDVILVLLIIFMVAAPLATVDIGVDLPASTAQQQPRPDKPIFVTVKPDLSLAVGEDTVARDALKSTLDTLTEGKTDQRIFVRADKTISYGDLMETMNLLRNAGYLKIALVGLEAPGESK*