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SCNpilot_expt_500_p_scaffold_24911_2

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: 702..1391

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V6A4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 227.0
  • Bit_score: 392
  • Evalue 3.40e-106
  • rbh
Cold shock-like protein CspG {ECO:0000313|EMBL:CEG08146.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.6
  • Coverage: 227.0
  • Bit_score: 392
  • Evalue 3.70e-106
cold shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 221.0
  • Bit_score: 375
  • Evalue 1.40e-101
  • rbh

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGGCAGACGCCTGGAGTGTGGGGTCGGGGGTCATGGGGTCGGACGATTTTGAGTCCAAGAGGCTGACCGGGCCGGGCGCGGGAACGACCGGCCGGTCTTCATCGGGTGATTACGCCGGACAATACCACGAGGGCGTGGCCGATCCTTTTTCCGGGCTGGACACCGCCGCCGCCAATCTGGTCGAGCTCAGCGGCGTCATCAAATGGTTCGACGCCTCCAAGGGTTACGGCTTCATCGTGCCGGACAATGGCTGGCCGGATATTCTGCTGCATGTCACCGTGCTGCGCCGCGACGGCTATCAGACGGCCTATGAAGGCGCGCGACTGGTCTGCGAATGCGTCCAGCGCCAGAAGGGCTATCAGGCCTTCCGCGTCGTCTCGATGGATGAGTCGACCGCGATCCATCCGGCGCAGATGCTGCCGCCCCGCACCCATGTCAGCGTGACCCCGACCAGCGGCCTCGAGCGCGCGCAGGTGAAGTGGTTCAATCGGCTGCGCGGGTTCGGCTTCCTGTCCTGCGGCGAGGGCACGCCGGACATCTTCGTGCACATGGAAACGCTGCGCCGTTACGGCATGACCGAATTGCGCCCCGGCCAGTATGTGCTGGTGCGCTATGGGCCGGGCTCCAAGGGCATGATGGCGGCCGAGATCCAGCCGGAAACCGGCGCGGGCGGTCTGTCCTCGCACTGA
PROTEIN sequence
Length: 230
MADAWSVGSGVMGSDDFESKRLTGPGAGTTGRSSSGDYAGQYHEGVADPFSGLDTAAANLVELSGVIKWFDASKGYGFIVPDNGWPDILLHVTVLRRDGYQTAYEGARLVCECVQRQKGYQAFRVVSMDESTAIHPAQMLPPRTHVSVTPTSGLERAQVKWFNRLRGFGFLSCGEGTPDIFVHMETLRRYGMTELRPGQYVLVRYGPGSKGMMAAEIQPETGAGGLSSH*