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SCNpilot_expt_500_p_scaffold_25950_1

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: 1..1002

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034D6719 similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 287.0
  • Bit_score: 469
  • Evalue 2.50e-129
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 301.0
  • Bit_score: 441
  • Evalue 1.70e-121
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEI06046.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 301.0
  • Bit_score: 441
  • Evalue 7.70e-121

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
GTCCGGTTTTTCGAGGTCTGGCAGGATCTTGTTTTTCGGCATGCTATAGGCTGCCCTTCCCACAACGAAATTGATAATGTGCATCGTCATCATTCGCGGGATTTATCATTGAGCCACGACCTCGACATCGCGCTGCTGCGAACGTTCGTCGCCATCGTCGACACCGGCGGCCTGACATCGGCCGGAAAACGGGTCGGCCGCACCCAGCCCGCGGTCACGCATCAGATGAAGCGGCTCGAGGAAATCGTCGGCCACACGCTGTTCGACAGCAACCGCCGCCACTTGTCCCTCACCCGCGACGGCGAGGTGCTGCTCGAATTCGCCCGCGCCATGCTGCGGCTCAACGACGAAGCGCGCGAACGCTTCGCCGCGCCGGATATCGCGGGCCACGTGACGCTGGGCACGCCCGACCTCTACGCCTCCTACATCCTGCCCGATGTGCTCGGCAGTTTCTCGCGCTCCCATCCCAATGTGGAGATCCAGCTTCGCTGCACGCGCAGCATTCATCTGCATGCGGCGCTGGAGCGCGGCGAGATCGATATCGCGCTGATGACCAACCAGCCGGAATTCCGGCGCGGCGAACTGGTCCGCCTCGAACCGCTGGTCTGGGTCGCGGGCGCGGGCAGCGAGCCGGAGCGGCGCAAACCGCTGCCGCTGGCGGTGCTGCCGCAGGGCAGCGTCTATCGCCATCACGCGCTGGAGGCGCTGGGCGCGGCCGGCCTGCAATGGTCGGGGCGCTCGGTGTGCGACAGCATCGCCGGACTGCAGGCCGCCGTGCTCGCGGGGCTCGCGGTCTCGGTGTTTCCGCGCTGCGCGGTGACGCCGGGCGTGCGCTGCCTCGACGAAAGCGACGGGCTGCCGAAGCTGCCGCCGATCGAGCTTGTCATGCACCGCAAGCACGAGGGCGTTTCCGACGCCGCCGAACAACTCGCGCAATACATCGCCGCGCAGCTCGGCGACAAACCGGCGCGCGGCCCCTCGCCCGCTCTCGCGGACAAATGA
PROTEIN sequence
Length: 334
VRFFEVWQDLVFRHAIGCPSHNEIDNVHRHHSRDLSLSHDLDIALLRTFVAIVDTGGLTSAGKRVGRTQPAVTHQMKRLEEIVGHTLFDSNRRHLSLTRDGEVLLEFARAMLRLNDEARERFAAPDIAGHVTLGTPDLYASYILPDVLGSFSRSHPNVEIQLRCTRSIHLHAALERGEIDIALMTNQPEFRRGELVRLEPLVWVAGAGSEPERRKPLPLAVLPQGSVYRHHALEALGAAGLQWSGRSVCDSIAGLQAAVLAGLAVSVFPRCAVTPGVRCLDESDGLPKLPPIELVMHRKHEGVSDAAEQLAQYIAAQLGDKPARGPSPALADK*