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SCNpilot_expt_500_p_scaffold_27003_2

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: comp(246..722)

Top 3 Functional Annotations

Value Algorithm Source
Endoribonuclease-like protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZEM0_ROSLO similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 157.0
  • Bit_score: 171
  • Evalue 5.10e-40
endoribonuclease-like protein similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 157.0
  • Bit_score: 171
  • Evalue 1.60e-40
Endoribonuclease-like protein {ECO:0000313|EMBL:AEI95916.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC; 15278 / OCh 149).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 157.0
  • Bit_score: 171
  • Evalue 7.10e-40

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Taxonomy

Roseobacter litoralis → Roseobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGCTCGATATGCTCGACCCAATCGAGAAGCGTCTGAATGAAGCAGGGCTCGCTCTGCCGGAGCCGTGGACGCCGAGAGGAAACTTCGTGCCGTTGAAGATGGCCGGAAATCTGGTTTTTATGTCAGGGCAGATTTGTGAGTGGAACGGCGAAGTCGTGTGTCGCGGGCCGGTGGGGCAAGGGTGCACGCTTGATGAAGCACGGCTTGCCGCGCAGACCTGTACGCTCAATCTTCTTTATCACTTGAAGAATGTATGTGAGGGGAAGCTGAGCCGGGTTTCCTCGATCATCCGCGTCGGCGGGTTCGTCAATTGCCTGGACGACTTCAAGGATTCGCCGGCCGTTATCAACGGCGCTTCGGATCTGCTTTTTATGCTCTTTGGCGAGGCCGGCCGTCACGCGCGCACCGCGGTCGGCGTGCGGGGCCTTCCCGGCGGCGCCGCCGTCGAAGTGGACATGATCGCCGCGGTCGACTGA
PROTEIN sequence
Length: 159
MLDMLDPIEKRLNEAGLALPEPWTPRGNFVPLKMAGNLVFMSGQICEWNGEVVCRGPVGQGCTLDEARLAAQTCTLNLLYHLKNVCEGKLSRVSSIIRVGGFVNCLDDFKDSPAVINGASDLLFMLFGEAGRHARTAVGVRGLPGGAAVEVDMIAAVD*