ggKbase home page

SCNpilot_expt_500_p_scaffold_45213_2

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: 565..1146

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VFB1_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 181.0
  • Bit_score: 263
  • Evalue 1.60e-67
regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 181.0
  • Bit_score: 263
  • Evalue 4.90e-68
Regulatory protein TetR {ECO:0000313|EMBL:ADU42899.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 181.0
  • Bit_score: 263
  • Evalue 2.20e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
TTGGCCAAAGCTGTTGCGGAGCGCGCGGACATCCTGCCGGTTTTGGCCGAGGTGTTCCGCGCCCATGGCTATGAAGGCGCGACGCTGGCGCTGCTGTCGGAGGCGAGCGGCCTCGGCAAGGGCAGCCTCTATCACTTCTTTCCCGGCGGAAAGCAGCAGATGTGCGCCGAGGTGCTGGCGGAGATCGACGGCTGGTTCGCGGCCAACATCTTCCGGCCGCTGCTTGAGGGCGATGATCCCGAAGCGGCGATCGCCGGCATGATCGCGGCGGTGGAACGCTATTTCAAATCCGGGCGGCGGGTGTGCCTGGTCGGCGTGGTGGCGCTCGGCGCGGCGCGCGATGCCTTTGCGGAGCCGGTGCGGGCCTATTTCAAGCGATGGGCCGAGGCGCTGGCGTCCGCTCTGCGCCGCTGCGGGTGTCCTGCGGCGACGGCGCGCCGCCGCGCCGAGGACGCGATGCTGGTGATCCAGGGCGCGCTGGTGATCGCACGCGCGCTCGACGATCCGAAGGTGTTCTCCCGAGCCATGGCCGATCTCAAGGGCCGCCTGCTCGTCGACGTGGCGAGCACGGAGCCGGTCTGA
PROTEIN sequence
Length: 194
LAKAVAERADILPVLAEVFRAHGYEGATLALLSEASGLGKGSLYHFFPGGKQQMCAEVLAEIDGWFAANIFRPLLEGDDPEAAIAGMIAAVERYFKSGRRVCLVGVVALGAARDAFAEPVRAYFKRWAEALASALRRCGCPAATARRRAEDAMLVIQGALVIARALDDPKVFSRAMADLKGRLLVDVASTEPV*