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SCNpilot_expt_500_p_scaffold_46485_1

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

partial RP 36 / 55 MC: 1 BSCG 36 / 51 MC: 4 ASCG 10 / 38
Location: comp(1..1197)

Top 3 Functional Annotations

Value Algorithm Source
Porin n=2 Tax=Oligotropha carboxidovorans RepID=B6JGA1_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 404.0
  • Bit_score: 539
  • Evalue 3.00e-150
  • rbh
putative porin protein similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 404.0
  • Bit_score: 539
  • Evalue 9.50e-151
  • rbh
Putative porin protein {ECO:0000313|EMBL:AEI06892.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 404.0
  • Bit_score: 539
  • Evalue 4.20e-150

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
GACACCTGCATCAAGCTCGGCGGCTATATGCGCGCCGAATTCAACGTCAATGGCGCGAACTCTGACGCGGCGTTCCTGAACGGCGCCGGCGGTCAGCACAGCCTGTACAACAACGCGAACCAGACCCGCGCTCGTATCATGATGCAGGTTGATACCCGCACCGCGACCGAGTACGGCGTTGTCCGCACCTTCGCTTCGTTCGGCCCGCAGTGGACGACGGGTGACGCGAACGGCTCCGGCGGCATCCGCGTTGAAGCCGCGTTCATCCAGTTCGCTGGCTTCACCTTCGGTCGTTCGGCTTCGGCCTATGCGCTGCCGTGGAACGCTGGTCCGGGTGGCAACCTGAACTCGATCCTCATGGGCGGCCCGAACTACGACGCCGGCGTGAACAACATCCAGTACACCTGGCAGTTCGGCAACGGCATGTCGGCCAGCCTCGGTGTTGACGAGGGAAGCCCGTCGAACCGTACCGGCGTGTACAACGGCAACGATGCCATGAGCGTTCTGGGCGTTTACAACGACCGCTATCAGGGCACCACGACTGCGCCCGACGTTGTCGGTAACATCCGCCTTGACCAGGCTTGGGGTCTGATCCAGTTGTCGGCCGCGGCCCATCAGGTCACCGGCGGCTACTTCAACTCCAACGGCACCACGACCGGCGGTACGGAAGTTGCTGGCCATCCGGACGACAAGTGGGGCTTCGCCATCACCGGCGCCCTGCAGATCAAGAACCTGCCGACCGGCCCCGGCGACGACATCAAGCTGAGCGCCACCTACACCGAGGGTGCGCTGCGCTACGTGCTGGGCAACTCGGGTAACACCCCGCAGAGCCTCTCGCTGTTCGGCAGCGGCAGCAATGGTGCGTACAACAACATCGCGACCGCTCCGATCGCCGATGGCGTCTACGGCACCGGCGTGGGCATTGGCGCTGGTCCGCTCCAGCTCACCAAGGCCTGGGGTCTCAACGGTGCGTTCAACCACAACTGGAACCAGAACTGGTCGTCCAGCGTGTTCGGTGCATACTCCAAGGTTGACTACAACTCGGTTGCGTCGGGCATGATCTGCGCCAAGGCTGGCTATGCTGCCGCTGGTGTGGCCTGCAACCCCGACTTCAACATCTCCCAGGTCGGTTTCGTGACCCGGTGGACCCCGGTCAAGAACCTGACGTTCTCGGGCGAAGTCACCTGGACCAACATC
PROTEIN sequence
Length: 399
DTCIKLGGYMRAEFNVNGANSDAAFLNGAGGQHSLYNNANQTRARIMMQVDTRTATEYGVVRTFASFGPQWTTGDANGSGGIRVEAAFIQFAGFTFGRSASAYALPWNAGPGGNLNSILMGGPNYDAGVNNIQYTWQFGNGMSASLGVDEGSPSNRTGVYNGNDAMSVLGVYNDRYQGTTTAPDVVGNIRLDQAWGLIQLSAAAHQVTGGYFNSNGTTTGGTEVAGHPDDKWGFAITGALQIKNLPTGPGDDIKLSATYTEGALRYVLGNSGNTPQSLSLFGSGSNGAYNNIATAPIADGVYGTGVGIGAGPLQLTKAWGLNGAFNHNWNQNWSSSVFGAYSKVDYNSVASGMICAKAGYAAAGVACNPDFNISQVGFVTRWTPVKNLTFSGEVTWTNI