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SCNpilot_expt_500_p_scaffold_4768_5

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

partial RP 29 / 55 MC: 3 BSCG 30 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(4488..5393)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR-family n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0KBJ5_CUPNH similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 296.0
  • Bit_score: 405
  • Evalue 5.20e-110
  • rbh
h16_A1493; LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 296.0
  • Bit_score: 405
  • Evalue 1.60e-110
  • rbh
Transcriptional regulator, LysR-family {ECO:0000313|EMBL:CAJ92626.1}; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 296.0
  • Bit_score: 405
  • Evalue 7.20e-110

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Taxonomy

Cupriavidus necator → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGAAGCGCAAGATCCCGAGCACGGTCGCGCTCGCCGTATTCGACGCGGCCGCCAGGTACGAGAGCTTCGCGCGTGCCGCAACCGAGCTCTGCCTCACGGAAAGCGCCGTCAGCCGCCAGATCGCCGCGCTCGAGAACTACCTCGGCGTCAGGCTCTTCGAGCGGGTGAAGAAGCAGGTGGTGCTCAGCGAGGCCGGCCGGCACTACAGCCGCACGATCGCGGTCAACCTGGACGAGATCGAGCTGCACACGCGCTCGCTGATGGCGCACAAGGGCGCCGGCGGCGTGCTCGAGCTGGCGGTGATCCCGACCTTCGCGAACCGATGGCTGCTCCCGCGCCTGCACGAGTTCCGCAGGCAATACCCCGACATCACGCTGAACCTCTCGGAGCGCCCGGAGCCCTTTCCGTTCCGCGGCACGATCTTCGATGCCGCGCTACACTTCGACAGCCCTTCCTGGGTCGACGTCGTCAAGATCGAGCTCTTCGAGGAAGCGGTCGTCCCGGTGCTCAATCCCGCCCATTTCGATGTTTCACGCCTCTCGTCGCCGCGCGAACTGCTCGGCCTCCCGCTGCTGCACAAGTCGACCCGCGCCGACGCCTGGCCGCGCTGGTTCGAGCTCGCCGGCCATCGGCACGAGGGGCCCGTGCCCGGAATGCGCTTCGAGCTGTACGGCATGGTCATCGAGGCTGCGCGCGCCGGCCTCGGCGTCGGCCTCGTGCCGCGCTTCTATGTCCAGGACGAGATCAACCGGGGCGATCTCGTCATTCCCTTCGACATCGCGCTCAAGCACATGAAACGCTACTGCCTGGTCTTTCCCGAGTACAAGCAGGATTCTCCCCTGGTCGCGAAGCTGCGCGACTGGATCGTGGCGACGGCCGGCGAGTTCGACCGGGCGCGAGCATAG
PROTEIN sequence
Length: 302
MKRKIPSTVALAVFDAAARYESFARAATELCLTESAVSRQIAALENYLGVRLFERVKKQVVLSEAGRHYSRTIAVNLDEIELHTRSLMAHKGAGGVLELAVIPTFANRWLLPRLHEFRRQYPDITLNLSERPEPFPFRGTIFDAALHFDSPSWVDVVKIELFEEAVVPVLNPAHFDVSRLSSPRELLGLPLLHKSTRADAWPRWFELAGHRHEGPVPGMRFELYGMVIEAARAGLGVGLVPRFYVQDEINRGDLVIPFDIALKHMKRYCLVFPEYKQDSPLVAKLRDWIVATAGEFDRARA*