ggKbase home page

SCNpilot_expt_500_p_scaffold_9158_2

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

partial RP 29 / 55 MC: 3 BSCG 30 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 877..1812

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4Y0H8_ALCXX similarity UNIREF
DB: UNIREF100
  • Identity: 36.2
  • Coverage: 304.0
  • Bit_score: 193
  • Evalue 4.20e-46
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG23955.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.7
  • Coverage: 326.0
  • Bit_score: 198
  • Evalue 1.10e-47
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 304.0
  • Bit_score: 193
  • Evalue 1.30e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cupriavidus basilensis → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGCAAGCCTCGCCGGGCGTAGCCCAACTGAGCACGCGCAGCGCCTCCGGCTGGAAGGCGGGCGTGCGCGAGAATTTCCTCCCGCTCGAGGTCGCGGTCACGCGCCGTGATGACTTCCACGCGGCACTCACCGCGAGGCAGCTCGGCACGGTGCAACTGGCGTACGTCGATGCCGACGCGCATCGCGTCACGCGCACGCGCACGTTGTCCGAGCGCTCCGATCGCGCCTTCCTGAAGCTCTTCTGGCAAGTGGACGGCATGAGCCGGCTCGAGCAGGCCGGCCGCCGCAGCGAATTGACTCCCGGTGCGTGGACGTTCTACGACACGTCGCGTCCGTATTCGATCGACATCGGCGACGCCAGCCGATTCGCCGTCGCGCTGCTGCCGCTGGACGCCTGCCCGGAGTGGAAGTCGCTGGCTACGAACGGGGTGGGGCGGTCGTTCCACGCCACCGGCGCGTCGCGCGTCGCGCTCGGCTCGGTCCTGACTGCGTTGCGCGACCCGCAGGCCTACGATCCGCCGTCTGCCGACGCGATCTGCACGTCGATCGCGGGCCTCATGCTCGCGGCAGCGAAGAGCGCGAGTGACGTACGCCACACGCGAGTCGACGCGCAACTGGCGCGCGCACGTCGCTACATCGCCAGCCGCATCGAGGATCCCGAGCTCACCCCGGACGCCGTCGCCGCCGAGCTGCGCGTTTCGCGCCGTACGCTGTATGCGTGGTTCGAGCCCTTCGGGCAGTCGCCGGGCGCCTTCATCCAGCAGACCCGCCTCGATCGCTGCCGGCGGGCAATGGTCGACGCCGACAGCCGCGACAAGACGATCACGCGCATTGCCTTCGACAACGGCTTCAGCGACATGGCGCATTTCAGCCGCCTCTTCAAGGCGGCGTACGGCGCCGGCCCGCGCGAGTATCGCAGGCGGTCGCGGATCTGA
PROTEIN sequence
Length: 312
MQASPGVAQLSTRSASGWKAGVRENFLPLEVAVTRRDDFHAALTARQLGTVQLAYVDADAHRVTRTRTLSERSDRAFLKLFWQVDGMSRLEQAGRRSELTPGAWTFYDTSRPYSIDIGDASRFAVALLPLDACPEWKSLATNGVGRSFHATGASRVALGSVLTALRDPQAYDPPSADAICTSIAGLMLAAAKSASDVRHTRVDAQLARARRYIASRIEDPELTPDAVAAELRVSRRTLYAWFEPFGQSPGAFIQQTRLDRCRRAMVDADSRDKTITRIAFDNGFSDMAHFSRLFKAAYGAGPREYRRRSRI*