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SCNpilot_expt_500_p_scaffold_10273_1

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

partial RP 29 / 55 MC: 3 BSCG 30 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(2..574)

Top 3 Functional Annotations

Value Algorithm Source
TRAP dicarboxylate transporter-DctM subunit n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EC86_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 198.0
  • Bit_score: 301
  • Evalue 6.60e-79
TRAP dicarboxylate transporter-DctM subunit {ECO:0000313|EMBL:EKZ96553.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 198.0
  • Bit_score: 301
  • Evalue 9.30e-79
tripartite ATP-independent periplasmic transporter dctm subunit similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 196.0
  • Bit_score: 300
  • Evalue 3.60e-79

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Taxonomy

Cupriavidus sp. HMR-1 → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGACCGGGTTCGCGATCTTCGCGGTCTTCATCGTGCTGATGCTCGCCGGGGTGCCGATCGGCGTGGCGCTGATGCTGGCCGGCTCGGTGGGCATCGGCTTCGCCGACCTGGGCTGGCTGTCCATCCCCAACAACTTCTACGCCGGCATCGCGAAATACCCGCTGCTGGCGCTGCCGATGTTCGTGCTGGTCGGCTCGATCTTCGATCGCTCCGGGGTCGCGCAGCGCCTGGTCAACTTCGCGCTGGCCATCGTCGGACGCGGCCCTGGCATGCTGCCCATGGTGGCCATCGGCGTGGCCATGTTCCTCGGCGGCATCTCCGGCTCGGGCCCGGCCAACGCGGCCGCGGTCGGCGGCGTGATGCTCGCGGCGATGGCGCGCGCCGGCTACCCGCCGGCCTACTCGGCCAGCGTGATCGGGGCGGCCGCGGCCACCGACATCCTGATCCCGCCCTCGATCGCCTTCATCGTCTACTCGGTGATGGTGCCCGGCGCTTCGGTGCCGGCGCTGTTCGCTGCGGGCATGGTGCCTGGCGTGCTCGCCGGCTTCGCGCTGATCGTGCCGGCGGTGTGG
PROTEIN sequence
Length: 191
MTGFAIFAVFIVLMLAGVPIGVALMLAGSVGIGFADLGWLSIPNNFYAGIAKYPLLALPMFVLVGSIFDRSGVAQRLVNFALAIVGRGPGMLPMVAIGVAMFLGGISGSGPANAAAVGGVMLAAMARAGYPPAYSASVIGAAAATDILIPPSIAFIVYSVMVPGASVPALFAAGMVPGVLAGFALIVPAVW