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SCNpilot_expt_500_p_scaffold_13659_1

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

partial RP 29 / 55 MC: 3 BSCG 30 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(1..285)

Top 3 Functional Annotations

Value Algorithm Source
UPF0301 protein RSIPO_02325 n=5 Tax=Ralstonia solanacearum RepID=B5SH41_RALSL similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 88.0
  • Bit_score: 144
  • Evalue 5.20e-32
transcriptional regulator; K07735 putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 88.0
  • Bit_score: 144
  • Evalue 1.60e-32
UPF0301 protein KR96_06320 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 88.0
  • Bit_score: 144
  • Evalue 7.30e-32

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Taxonomy

Ralstonia solanacearum → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGGGCGCCCAGACCGTCTCCAACCTGACCAACCAGTTCCTGATCGCCATGCCCGACATGGCGGATCCGAACTTCGGCGGCACCGTCGTGTTCGTGGTCGAGCACAACGAGAAGGGTGCCCTTGGCTTGGTCATCAACCGGCCGATGGAGATCGATCTGGCCACGCTGTTCGAGCGCATCGATCTCAAGCTCGAGATCGCGCCGCTGGCCGGTTCGCCGGTGTTCTTCGGGGGGCCGGTCCAGATGGACCGCGGCTTCGTGCTGCACCAGCCGGTCGGCGAATGG
PROTEIN sequence
Length: 95
MGAQTVSNLTNQFLIAMPDMADPNFGGTVVFVVEHNEKGALGLVINRPMEIDLATLFERIDLKLEIAPLAGSPVFFGGPVQMDRGFVLHQPVGEW