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SCNpilot_expt_500_p_scaffold_24208_1

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

partial RP 29 / 55 MC: 3 BSCG 30 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 2..667

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VAW5_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 27.8
  • Coverage: 205.0
  • Bit_score: 103
  • Evalue 2.40e-19
GntR family transcriptional regulator {ECO:0000313|EMBL:CDZ93299.1}; TaxID=1499686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 20_BN.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.8
  • Coverage: 206.0
  • Bit_score: 141
  • Evalue 1.90e-30
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 27.8
  • Coverage: 205.0
  • Bit_score: 103
  • Evalue 7.40e-20

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Taxonomy

Pseudomonas sp. 20_BN → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
AGCACCCCTGCCAGGTCGGCCGAGCCGGGCCCGTCCGCCGTACAGCGCGTCGTCGACCTCGTGCTCTCGCGCATCCGCTCGGGCGAGTACGCGCCGGGGCAGATCATCGTGGCCCGGGACCTGATGACCGAGCTCGGCGTCAGCAAGGCGCCGGTGCGCGAGGGAATCCACGTGCTGGTCGGCGAAGGGGTCATGGAGCTGCTTCCGAACCGTTCGGCACGGATCAAGAGGCTCTCCGCAAAGGACACGGTCGACTTCACCGAGATCTGGGCCGTCATAAACGGCCTGAACATCCGCCTGGCAGCGGCCAAGCTGGACCGGGCCGAGGACCGCGACAGGGTACGCAAGGCGCTGGCGCGAATACAGGCGACCGGACGTACCCGGGTACCCTACGATTTCTTCATGGCCGTCGGCCAGCTCCACGCGACGCTGGCCGAGATTTCGCAGAACAGCTTCGCCCTCGCCTTCATCGGCCGCGTGCACCTCGTCCACTTCTATCGGCACATCGAGCGCGGGTTCCCCGGGGCCTACTGGGACGCCCACCTCCTCGCCTTCAAGCGCATCGGAGAGGCGCTGCTCGAGCAGGACGGCGACCGCGCCGAACGGATCTACCTCAAGCACATGCGGTGGGTAGCGGGCCTGATGCGCCAGGGCACGGCCACCTAG
PROTEIN sequence
Length: 222
STPARSAEPGPSAVQRVVDLVLSRIRSGEYAPGQIIVARDLMTELGVSKAPVREGIHVLVGEGVMELLPNRSARIKRLSAKDTVDFTEIWAVINGLNIRLAAAKLDRAEDRDRVRKALARIQATGRTRVPYDFFMAVGQLHATLAEISQNSFALAFIGRVHLVHFYRHIERGFPGAYWDAHLLAFKRIGEALLEQDGDRAERIYLKHMRWVAGLMRQGTAT*