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SCNpilot_expt_500_p_scaffold_31556_2

Organism: SCNPILOT_EXPT_1000_BF_Burkholderiales_68_66

partial RP 29 / 55 MC: 3 BSCG 30 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(484..1698)

Top 3 Functional Annotations

Value Algorithm Source
lpdA; Dihydrolipoamide dehydrogenase (component of pyruvate and 2-oxoglutarate dehydrogenases complexes) oxidoreductase protein (EC:1.8.1.4) similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 405.0
  • Bit_score: 580
  • Evalue 3.80e-163
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692, ECO:0000313|EMBL:CBJ38520.1};; TaxID=859655 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CMR15.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 405.0
  • Bit_score: 580
  • Evalue 1.70e-162
dihydrolipoamide dehydrogenase n=1 Tax=Ralstonia solanacearum RepID=UPI0002DF7ADA similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 405.0
  • Bit_score: 581
  • Evalue 5.40e-163

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Taxonomy

Ralstonia solanacearum → Ralstonia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
ATCGCGGTCGACGAGCCGCGGCTCGACCTGGCCAAGATGCTCGCGCGCAAGGACGCCATCGTGCGCAAGATGACCAAGGGCATCGAGTTCCTGTTCCGCAAGAACAAGATCGCCTGGCTGCAGGGGCACGGCCGCTTCGTGGGCGCCGAGGACGGCGCCTACCGGCTCGAGATCGACGACGATGCCTCGGACGCGGGCAAGGCGCCCCAGCTGGTGGATCCCCAGCACGTGGTCATCGCGACCGGCTCCAAGGCCCGCCACCTGCCGGGCATCCCGGTCGACAACCAGCTGATCTGCAACAACGAGGGTGCGCTCTCGCTGCCCGAGGTGCCGTGGCGGCTGGGCGTGATCGGGGCCGGCGTGATCGGGCTCGAGCTGGGCTCGGTATGGCGCCGCCTGGGTTCGCAGGTCACCCTGCTCGAGGCGCTGCCGGACTTCCTCGCCGCGGCCGACGCGGGCGTGCAGAAGGAAGCCTGGAAGCTGCTCACCCGCCAGGGCCTGAAGATCGAGCTCGGCGTGAAGATCGCCTCGGCCGAGGCCGGCAAGAAGGGCGTGAAGGTCGCCTATGCCGATGCCAAGGGCGCCGCGCACGTGCTCGAGGTCGACCGCCTGATCGTGTCGGTGGGCCGGGTGCCCAACACCGACGGGCTCGGGCTCGACGCGGTCGGGCTGGCGGCCGACGCGCGCGGCTTCGTGCCGGTCGACGCGCAGTGCCGCACCGCGGTGCCCAACGTCTGGGCCATCGGCGACGTGGTGCGCGGGCCGATGCTCGCGCACAAGGCCGAGGAGGAGGGCGTGATGGTGGCCGAGCTCATCGCCGGCCAGAAGCCGCACATCGACTACAACTGCATTCCCGCGGTCATCTACACCTCGCCGGAGATCGCCTGGGTCGGGCGCACCGAGCAGCAGCTCGAGGCCGAGGGGCGCGCCTACAAGAGCGGCCAGTTCCCGTTCGCCGCCAACGGTCGCGCGCTGGGCATGGGCGCGGCGGACGGTTTCGTCAAGGTGCTCGCCGATGCGGCCACCGACGAGGTGCTCGGCGTGCACATCGTGGCGGCCACCGCCTCCGACCTGATCGCCGAAGCGGTGATGGCGATGGAGTTCAGGGCTTCGGCCGAGGACATCGGACGCATCTGCCACGCGCATCCGTCGATGTCGGAGGCCGTGCGCGAAGCGGCGCTGGCGGCCACCGACAAGCGCGCCCTGAATATCTAG
PROTEIN sequence
Length: 405
IAVDEPRLDLAKMLARKDAIVRKMTKGIEFLFRKNKIAWLQGHGRFVGAEDGAYRLEIDDDASDAGKAPQLVDPQHVVIATGSKARHLPGIPVDNQLICNNEGALSLPEVPWRLGVIGAGVIGLELGSVWRRLGSQVTLLEALPDFLAAADAGVQKEAWKLLTRQGLKIELGVKIASAEAGKKGVKVAYADAKGAAHVLEVDRLIVSVGRVPNTDGLGLDAVGLAADARGFVPVDAQCRTAVPNVWAIGDVVRGPMLAHKAEEEGVMVAELIAGQKPHIDYNCIPAVIYTSPEIAWVGRTEQQLEAEGRAYKSGQFPFAANGRALGMGAADGFVKVLADAATDEVLGVHIVAATASDLIAEAVMAMEFRASAEDIGRICHAHPSMSEAVREAALAATDKRALNI*