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SCNpilot_expt_500_p_scaffold_18383_1

Organism: SCNPILOT_CONT_300_BF_Burkholderiales_67_33

partial RP 20 / 55 MC: 2 BSCG 23 / 51 MC: 1 ASCG 5 / 38
Location: comp(3..635)

Top 3 Functional Annotations

Value Algorithm Source
Putative Bug-like extra cytoplasmic solute receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1X9Z3_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 54.1
  • Coverage: 209.0
  • Bit_score: 217
  • Evalue 1.10e-53
putative Bug-like extra cytoplasmic solute receptor, TTT family similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 209.0
  • Bit_score: 217
  • Evalue 3.40e-54
Putative Bug-like extra cytoplasmic solute receptor, TTT family {ECO:0000313|EMBL:AGU49373.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 209.0
  • Bit_score: 217
  • Evalue 1.50e-53

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGAACTCAGTTTTCCCGCGCAAGATCGATGTTGCATCGTTTCTCTTCGCGGCGCTGCTTGCGAGTTTCGCAGCGAATAGCCAGCCGGTGTTTCCTCCCCGGCAGATCAACGTGGTCGTGCCCATGGCGGGTGGCACCGCGGACGTGCTCGCACGTCTCGTCGCACCAAAGTTGGCGCAAGCGCTGTCCACGACCGTCATCGTCGATAGCAGGCCTGGAGCGGGAGGGAACATCGCCACCGATCACGTCGCCAAGGGCCCGCAGGACGGCTCCCTGCTGCTGGTCGGCGTCAATGCCCCGTTGGTGGTGAACAATACCTTGTTCAAGAACCTGCCATACGATCCCGTCAGGGATTTCTCTCCGGTGACCATGGGCGTTTCGACGTCTCAGTATCTCGTGGTGCACCCGTCCTTGCCCGTGTACTCGGTCAAGGATTTCGTCGCCTACGTCAAGGCCCATCCAGGCTTTCCGTATGCATCGGTGGGGACCGGGGGCGCGTCGCACCTCACGATGGAAATGTTCCGCACCCAGGCCGACTTGCAGATGACTCATGTCCCGTATCGAGGCGCCGGGCCGGCGCTTACGGATCTCGTCGCGGGAAATGTGAAGGCGGCTTTTCTTGTCCCCGGAAAC
PROTEIN sequence
Length: 211
MNSVFPRKIDVASFLFAALLASFAANSQPVFPPRQINVVVPMAGGTADVLARLVAPKLAQALSTTVIVDSRPGAGGNIATDHVAKGPQDGSLLLVGVNAPLVVNNTLFKNLPYDPVRDFSPVTMGVSTSQYLVVHPSLPVYSVKDFVAYVKAHPGFPYASVGTGGASHLTMEMFRTQADLQMTHVPYRGAGPALTDLVAGNVKAAFLVPGN