ggKbase home page

SCNpilot_expt_500_p_scaffold_19306_2

Organism: SCNPILOT_CONT_300_BF_Burkholderiales_67_33

partial RP 20 / 55 MC: 2 BSCG 23 / 51 MC: 1 ASCG 5 / 38
Location: comp(291..2165)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.0
  • Coverage: 647.0
  • Bit_score: 567
  • Evalue 1.70e-158
two-component sensor histidine kinase; K10125 two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 622.0
  • Bit_score: 527
  • Evalue 4.50e-147
  • rbh
C4-dicarboxylate ABC transporter n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2HWS5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 647.0
  • Bit_score: 567
  • Evalue 1.20e-158
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cupriavidus sp. HPC(L) → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1875
ATGGCCATGCCCCCCATTTCCTTGCCCACCCCGGACGCCCGCCCCGCGCCGTCGTCCTTCCGGGTTCCCGGCCATGGCCGGGCATGGGCCTGTTTCGTCCTGATCGGCGCCGCGCTGCTGGCGGCCGCGCTGTGGGCGGCGGGAGGCATCGGCCGCGAGCAGGCCTACGCGGAAGTCGCGGCGGCGGCGCGCAACGCGGCGGCGCTCAAGGTCGCGCTGCTGACCGCCGAACTCGACAAGCAGCGCTCGCTGCCCTTCGTCCTGGCGCAGGACTCCGAGGTCCGGACGGCGTTGGCCACCGGCGACCCGGCGCGCTATGGCGCGCTGAATCTCAAGTTCGAGGCGCTGAGCCGGGATACCGGCGCCGCCGTCATCTACCTGCTCGATCCGCGCGGCGTGGGCGTGGCCGCCAGCAACTGGAACCAGCCCACCAGCTTCGTGGGATCGGACTATGCGTTCAGGCCCTATTTCCAGGGGGCGGCGCACGCCGGCCAGGCGGAGTATTTCGCGCTCGGCAACGTCAGCAACCACCCCGGCCTGTACCTGAGCCGGCAACTGGAGCAGGACGGCCGGACGCTGGGGGTGGTGGTCGTGAAAGTGGAGTTCGACGGTGTCGAGGCCGGCTGGCGGCGCTTTCCGGACCCGGTGTTCGTGACCGACGAGCATGGCGTCGTGCTGCTGTCGTCGCAGGACGACTGGCGCTTCCAGGTCTACGGCGCCCTGTCGGCGGCGCAGCGGGACGCGCTGCGGACCAGCCTGCAGTTCGGTGATGCGCCGCTGGCGCCGCTACCGCTGCAGGCGGCCCCGGTACGCGAGGGGCAGGTGTTGGCGAGCCTGCCCGGGCGGGCTGAACAGGAATACGTGCATGTGCAGGAACCGGTTCCCGGCACGCCGTGGCAGTTCCATCTGCTGGGCGCGACCCGCGAGGCCATGGCGCGCACGGCGGCATCGGCCCGCGTGGCCGCCGCGCTGCTGGTGCTGTGCGCCCTGTTCGCGGCGGGGATCTGGCTGCATCGCCGGCACCGCGCCCACGACCTCGTGCTGGTCCAGGCGGCCGCGCGCCAGGAGCTGGAGTCGCGCGTGGCGGCGCGCAGGGGCGAGCTGCGAGCCGCCAACGACCAGTTGCGGGCCGAGATGGAGGACCGGCGCCGCGCCGAAGCCGAGCTGCACAAGCTGCAGGAAGAACTGGTGCAGGCCAACAAACTGGCCTTCCTGGGCCAGATCACCGCCGGCGTGGCGCACGAGATCAACCAGCCGGTCGCGGCGATCCGCAGCTATGCCGACAACTCGGCCGCCTACCTGGACCGCGGCAATGTCGAGCAGGCGCGCGGCAACATGGCGTCGATCGCCGCGCTCACCCAGCGTATAGGCGTCATCACCGACGAGCTGCGGACCTTCTCGCGCAAGTCCTCCGGCGCTTCCTCCGGCCCCGAGCCAGTGGCCGCCGTCATCGACGGCGCACTGACGCTGGTCGGTGCCCAGATGCGCCTGCACGGCATCGCGCTCGAACGCACCGGTATCGATGATGGCCTGGCGGTACGCGCCGAGCGCGTGCGTCTGGAACAGGTGCTGGTCAACCTCCTGCAGAACGCCATCGAGGCGCTGGAGCAGACGCCCGGCCCCCGCATATGGATACACGCCGCGCGTGACGCGGATCAGGTCGTCATCGAGGTCGGCGACAACGGTTCCGGCCTGCCCGACAGCGTCATGGCGGCCCTCTACACCCCCTTCGTCACCACCAAGCCGCGCGGCCTCGGGCTGGGGCTGGTCATCAGCCGCGACATCGTTGCCGAGTTCGGCGGCACGCTGTCCGTGCGGACCGGACCGGGGCGCGGGGCGTGTTTCATCATCCGTCTTCCCGAGGCTGCTTCGTGA
PROTEIN sequence
Length: 625
MAMPPISLPTPDARPAPSSFRVPGHGRAWACFVLIGAALLAAALWAAGGIGREQAYAEVAAAARNAAALKVALLTAELDKQRSLPFVLAQDSEVRTALATGDPARYGALNLKFEALSRDTGAAVIYLLDPRGVGVAASNWNQPTSFVGSDYAFRPYFQGAAHAGQAEYFALGNVSNHPGLYLSRQLEQDGRTLGVVVVKVEFDGVEAGWRRFPDPVFVTDEHGVVLLSSQDDWRFQVYGALSAAQRDALRTSLQFGDAPLAPLPLQAAPVREGQVLASLPGRAEQEYVHVQEPVPGTPWQFHLLGATREAMARTAASARVAAALLVLCALFAAGIWLHRRHRAHDLVLVQAAARQELESRVAARRGELRAANDQLRAEMEDRRRAEAELHKLQEELVQANKLAFLGQITAGVAHEINQPVAAIRSYADNSAAYLDRGNVEQARGNMASIAALTQRIGVITDELRTFSRKSSGASSGPEPVAAVIDGALTLVGAQMRLHGIALERTGIDDGLAVRAERVRLEQVLVNLLQNAIEALEQTPGPRIWIHAARDADQVVIEVGDNGSGLPDSVMAALYTPFVTTKPRGLGLGLVISRDIVAEFGGTLSVRTGPGRGACFIIRLPEAAS*