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SCNpilot_expt_500_p_scaffold_29566_1

Organism: SCNPILOT_CONT_300_BF_Burkholderiales_67_33

partial RP 20 / 55 MC: 2 BSCG 23 / 51 MC: 1 ASCG 5 / 38
Location: 1..507

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HR14_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 167.0
  • Bit_score: 296
  • Evalue 1.40e-77
Transcriptional regulator {ECO:0000313|EMBL:EJN02918.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 167.0
  • Bit_score: 296
  • Evalue 2.00e-77
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 163.0
  • Bit_score: 153
  • Evalue 4.80e-35

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Taxonomy

Herbaspirillum sp. YR522 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
GCCAAGGACATGCTCGAACCCATCGGGCGGGAATGCAACGAGAGCGTGCTGGTGCGCATACGAGACGGCGCCGAGACGGTTTGCGTGGCGTGGTGGGATGCGCCGCACGCGTTGCGGGTGCACAGCCAATTGGGAGACCGCCGGCCGCTGTTCGTGGGCGCGTCGGGCAAACTGCTGTTGGCGCATGCGCCGGAGGACATCCAAGAGGGCATCTTGAGCGGCAAGCTGGAACGCTTCACGCCCAATACCATCGTCAAGCGCACCGAACTCCGGCGCGAGCTGAAGAAGATCCTGGCCGAAGGCCACAGCACTTCCCTGCTCGAGAAAAGCACTGACATGGTGGCGGTGGCCGCCCCCATCCGCGATGCCAGCGGTTCGGTCATCGCTTCGCTGTCGATGACTGCGCCTGTTACGCGCGTGCCCAGGAACAAACTGGGCAAGTATGTCGACATCATCAAGTTCGCCGCCGCGCGCTTTTCGGCTTCGCTCGGATATCAGGGCGAATAG
PROTEIN sequence
Length: 169
AKDMLEPIGRECNESVLVRIRDGAETVCVAWWDAPHALRVHSQLGDRRPLFVGASGKLLLAHAPEDIQEGILSGKLERFTPNTIVKRTELRRELKKILAEGHSTSLLEKSTDMVAVAAPIRDASGSVIASLSMTAPVTRVPRNKLGKYVDIIKFAAARFSASLGYQGE*