ggKbase home page

SCNpilot_expt_500_p_scaffold_39230_2

Organism: SCNPILOT_CONT_300_BF_Burkholderiales_67_33

partial RP 20 / 55 MC: 2 BSCG 23 / 51 MC: 1 ASCG 5 / 38
Location: comp(272..1141)

Top 3 Functional Annotations

Value Algorithm Source
Protocatechuate 3,4-dioxygenase beta subunit n=1 Tax=Variovorax sp. CF313 RepID=J2JP02_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 288.0
  • Bit_score: 362
  • Evalue 4.80e-97
Protocatechuate 3,4-dioxygenase beta subunit {ECO:0000313|EMBL:EJL69535.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 288.0
  • Bit_score: 362
  • Evalue 6.80e-97
putative intradiol ring-cleavage dioxygenase similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 288.0
  • Bit_score: 361
  • Evalue 3.40e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGTTGCCCAGTACTCCCGAATCACTGACACCCATCGTTGTGCAATCGATGGCAAATACATCCGACGCCCGGGTCAAGGAACTGCTATGCAGCCTGGTCAGGCACCTGCACGCCTTCGTGCTGGAAACCCGCCTGACCGAGGCCGAGTTCGAATATGCGCTGGGCTACATCAACGCCATCGGCCAGGCCACCTGCGACACCAAGAACGAAGCGGTGCTGGTGGCCGACCTGCTGGGGGTGTCGTCGCTGGTGGCGCTGCTGAACAACGCCGACCACCACGGCGAGTCGGATGCCGCGCTGCTGGGCCCGTTCTGGCGCGCCAATTCGCCCAGCCTGGAACCCGGCGCGTCGCTCGCGGCGCCGGGCACGCCTGGCATTCCGCTGGAGGGCAGCGGGCGGGTGCAGGACCGCGAGGGCCGGCCGGTGGCGGGCGTCACGGTGGACATCTGGCATGCCTCGCCCAGCGGCCTGTACGAAAACCAGGACGAAACCCAGCCCGACATGAACCTGCGCGGCCGCTACACCACCGACGAGAACGGCTGCTTCCGTTTTCGCTCGGTGCGGCCGGCCGGCTATCCGGTGCCGGTGGACGGGCCGGGCGGCGTGCTGCTGCGCGCCCAGGAGCGCCACGAGTTCCGGCCGGCGCACCTGCATTTCATGTTCTCCAAGCCCGGCTACAAGGTCCTGATCACCCAGGTCTACGCCGACGATTCGGAATTCCTGCACAGCGACCCCACCTTCGGCGTGACGCGCCGGCTGGTCGGCCAGTACCGGGTGGAGCCGCGCCCGGGCGGAGACGTCGCGGTGTTCGACCACTGCTTCACGCTGCTGGAAGGCGAGATGGTCTTCCCGCATCCCCCCATTCCCTGA
PROTEIN sequence
Length: 290
MLPSTPESLTPIVVQSMANTSDARVKELLCSLVRHLHAFVLETRLTEAEFEYALGYINAIGQATCDTKNEAVLVADLLGVSSLVALLNNADHHGESDAALLGPFWRANSPSLEPGASLAAPGTPGIPLEGSGRVQDREGRPVAGVTVDIWHASPSGLYENQDETQPDMNLRGRYTTDENGCFRFRSVRPAGYPVPVDGPGGVLLRAQERHEFRPAHLHFMFSKPGYKVLITQVYADDSEFLHSDPTFGVTRRLVGQYRVEPRPGGDVAVFDHCFTLLEGEMVFPHPPIP*