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SCNpilot_expt_500_p_scaffold_38649_1

Organism: SCNPILOT_CONT_300_BF_Burkholderiales_67_33

partial RP 20 / 55 MC: 2 BSCG 23 / 51 MC: 1 ASCG 5 / 38
Location: comp(1..513)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent siderophore receptor n=1 Tax=Pseudomonas sp. GM55 RepID=J3AP99_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 167.0
  • Bit_score: 154
  • Evalue 9.00e-35
Ligand-gated channel {ECO:0000313|EMBL:AHL34225.1}; TaxID=930166 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas brassicacearum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 170.0
  • Bit_score: 157
  • Evalue 1.50e-35
TonB-dependent outermembrane receptor similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 156.0
  • Bit_score: 128
  • Evalue 2.80e-27

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Taxonomy

Pseudomonas brassicacearum → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGCCGTCCATCCGCGCGCGCCGTGCCGAGCGCCGCCTGCACCAGGCCATCCGCGTCGCCCTGCTCGGCCTCGCGTTCACTATGGCGACTGGCGCGAGCCATGCCGCCGACGGTGTGTCCGCGTCCCCCACGGCCAAGGCGCCCTACCGCATTCCCGCCGGCCCGCTGGGCCGCACGCTGTCCGGCGTGGCCGTCGACGCCGGCGTCGCGTTGTCGTTCGATTCGGCGCTGACCCAGGGTCTGACCAGTCCGGAAGTGTCGGGCAGCTATTCCGTGCCGGAGGTGTTCTCGCGGTTGCTCGAAGGCAGCGGCCTGGAACTGGTGGGCCGCGGCGACGGCAGCTATACGCTGCGCCGGCAGCCGGCCGAAGCCCAGTTGCCGGCCGGCGCGGCCACGCAGACGCTGCCCGCGGTGGCGGTCACCGCCGCGCGCCTGGGCGCCGAGAACCTGCCGCCGGCCTACGAGGGCGGCCAGGTCGCGACGGGCGGCCGGCTGGGCATGCTGGGCAACGTC
PROTEIN sequence
Length: 171
MPSIRARRAERRLHQAIRVALLGLAFTMATGASHAADGVSASPTAKAPYRIPAGPLGRTLSGVAVDAGVALSFDSALTQGLTSPEVSGSYSVPEVFSRLLEGSGLELVGRGDGSYTLRRQPAEAQLPAGAATQTLPAVAVTAARLGAENLPPAYEGGQVATGGRLGMLGNV