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SCNpilot_expt_500_p_scaffold_41296_1

Organism: SCNPILOT_CONT_300_BF_Burkholderiales_67_33

partial RP 20 / 55 MC: 2 BSCG 23 / 51 MC: 1 ASCG 5 / 38
Location: comp(2..961)

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Herbaspirillum lusitanum RepID=UPI0003828687 similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 293.0
  • Bit_score: 361
  • Evalue 6.90e-97
  • rbh
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJL88221.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 307.0
  • Bit_score: 357
  • Evalue 2.40e-95
Xanthine transporter,putative similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 316.0
  • Bit_score: 284
  • Evalue 3.40e-74

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Taxonomy

Herbaspirillum sp. CF444 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGCGCGCCGCTTATCGACGTCCGATGATGAACAACGCCACACCTTCCGTCTCCTCTCCCTCTTCCCACGAATCCGCGCTGCGCCTGCTGCCGCTGGTCGCCATCGTCTTTTCCGGCTTCCTGGCGGTCGGCCTGCCGTTGCCCGCGTTGCCGCTCTACGTCAACGGCGTGCTCGATTTCAGTCCGCTGGTGGTGGGCTGGATCATCGGCCTGCAGCCGCTGACCACGATTCTTACCCGCAAGTTCGCCGGCACCTACGTCGACCGGCACGGCCCGCGCCAGTCCGTGATGATGGGTCTGCCCATGGCCGCGATGGCGGGCCTGCTCTACGTGGCCTCGGCGCTGATTCCGCATCCGTCGGCCGCGCTGGCGGTGCTGGTTGCCGGCCGCCTGCTGATGGGGCCGGCCGAGAGCCTGTTCCTGACCGGCACCATGACCTGGGGCATAGGCAGGGTGGGGCCCCAGCGCACGGGCATCGTGATGTCCTGGCAGGGCATCGCCATGTTCGCGGCGCTGGGCCTGGGTGCCCCCCTGGGGGTATGGGTCATGCAGAACGTGGATTTCCTCGCGGTGGGGCTGGCCACGGTGGCCTTCCCGCTGGTTGGCTTGGCGATCGCCTCGCGCGTGCCGCCCGTGCCAGTGGCCGCTGGCGCCCGCAAGCAGGTGCCGTTCCTGCGCGTGATCGGCATGATCTGGCGGCAGGGCGGCGCGCTGTCGCTGGCCTCGGCTCCCTTCGCCGTGCTGACCGCCTTCGTCGTACTGTATTTCGCCAGCAGCGGGTGGGAAGGCGCGGGCCTGGCCCTGACCGGTTTCGCCGCCGGCTACATCCTGGTGCGGCTGTTTTTCGGCCGGCTGCCGGATCAGTTGGGCGGGCGCAAGGTCGCGGCGGTTTCGCTGGTGATCGAGGCGCTGGGCCAGTTCCTGTTGTGGATGGCGCCCAGCCCCGGTTTCGCGCTGGCC
PROTEIN sequence
Length: 320
MRAAYRRPMMNNATPSVSSPSSHESALRLLPLVAIVFSGFLAVGLPLPALPLYVNGVLDFSPLVVGWIIGLQPLTTILTRKFAGTYVDRHGPRQSVMMGLPMAAMAGLLYVASALIPHPSAALAVLVAGRLLMGPAESLFLTGTMTWGIGRVGPQRTGIVMSWQGIAMFAALGLGAPLGVWVMQNVDFLAVGLATVAFPLVGLAIASRVPPVPVAAGARKQVPFLRVIGMIWRQGGALSLASAPFAVLTAFVVLYFASSGWEGAGLALTGFAAGYILVRLFFGRLPDQLGGRKVAAVSLVIEALGQFLLWMAPSPGFALA