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SCNpilot_expt_500_p_scaffold_45338_4

Organism: SCNPILOT_CONT_300_BF_Burkholderiales_67_33

partial RP 20 / 55 MC: 2 BSCG 23 / 51 MC: 1 ASCG 5 / 38
Location: 1552..2157

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbF n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IF65_BORPD similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 200.0
  • Bit_score: 276
  • Evalue 1.90e-71
trbF2; conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 200.0
  • Bit_score: 276
  • Evalue 5.80e-72
Conjugal transfer protein TrbF {ECO:0000313|EMBL:CAP44975.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 200.0
  • Bit_score: 276
  • Evalue 2.60e-71

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Taxonomy

Bordetella petrii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGCGCTTTCGGCGACCTGCGGTTCATTACGGTATTCCGCCCGAGCCGGCCACGCCTTACCAGAAGGCCGGCCAAGTCTGGGACGAGCGCATCGGCAGCGCGCGCGTGCAGGCGCGCAACTGGCGCTACTTCGCCTTCGGCTGCCTGCTGCTCGCGGGGGCTTCGATGGGCGACGATATGTGGTGGCGCGCCCACCGCTCGGTGGTCGTGCCCTATGTTGTGGAGATGTTCCGCGGCGACGTCCAGGCCGTGCATGAGGGCCGCGCGCCGTATCACCCGACGGACGGCGACATTGCCCAGCAGTTGGCCCGGTTCATCAACAACGTGCGCGCGATCTCCATTGATCCGGTCATCGTGCGCCAGAACTGGCTCGATGCTTATGCCTACACCACGGATCGGGGCGCCGCTTTCCTGAATGACTACGCCCGCGAGCATGACCCGTTTGCCGACATCGGCAAACGCTCGGTCACGGTCGAGGTGGTCAGCGTCGTGCGGGCCAGCGACCGTTCGTTCCAGGTGCAATGGGACGAGCGCACCTACGTCAACGGGTCGGCTGCCGGGACCGAGCACTGGACCGCCATTCTGACCACTGTGCTGCAACCGACC
PROTEIN sequence
Length: 202
MRFRRPAVHYGIPPEPATPYQKAGQVWDERIGSARVQARNWRYFAFGCLLLAGASMGDDMWWRAHRSVVVPYVVEMFRGDVQAVHEGRAPYHPTDGDIAQQLARFINNVRAISIDPVIVRQNWLDAYAYTTDRGAAFLNDYAREHDPFADIGKRSVTVEVVSVVRASDRSFQVQWDERTYVNGSAAGTEHWTAILTTVLQPT