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SCNpilot_expt_500_p_scaffold_47490_2

Organism: SCNPILOT_CONT_300_BF_Burkholderiales_67_33

partial RP 20 / 55 MC: 2 BSCG 23 / 51 MC: 1 ASCG 5 / 38
Location: comp(831..1175)

Top 3 Functional Annotations

Value Algorithm Source
Extra-cytoplasmic solute receptor family protein 119 n=2 Tax=Bordetella holmesii RepID=M5NJ44_9BORD similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 113.0
  • Bit_score: 125
  • Evalue 3.00e-26
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:KAK80516.1}; TaxID=1331212 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella holmesii CDC-H809-BH.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 113.0
  • Bit_score: 125
  • Evalue 4.20e-26
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 109.0
  • Bit_score: 97
  • Evalue 2.10e-18

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Taxonomy

Bordetella holmesii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATCGGCCTGGTGCAGGCCAAGCGCGTGACGCCCCTGTTCGTGACCGCCGGCCAGCGCTTCCCGCAATTCCCCAGCGTGCCGTCCGCGCCGGAAGCCGGACTGCCCGAGCTGGACGTGGACAACTGGCACGCGCTGTTCGCGCCGGCCGGCCTGCCCGCGCCCGTGCGCGCCACGCTGGAGGCGGCGGTCAACAAGGCCTTGCAGGCGCCCGAGGTGAAGAAGCAGTTCGAATCGCTGGGCGCCGCGCCCACGGGCAGCACCGGCAAGGAGCTGGCCGAGAAAGTCACCGCGGAAACCGCGCGCTGGACGAAAATCGTCGACGACAACGGCATCAAGGCACAGTAG
PROTEIN sequence
Length: 115
IGLVQAKRVTPLFVTAGQRFPQFPSVPSAPEAGLPELDVDNWHALFAPAGLPAPVRATLEAAVNKALQAPEVKKQFESLGAAPTGSTGKELAEKVTAETARWTKIVDDNGIKAQ*