ggKbase home page

SCNpilot_expt_500_p_scaffold_53025_2

Organism: SCNPILOT_CONT_300_BF_Burkholderiales_67_33

partial RP 20 / 55 MC: 2 BSCG 23 / 51 MC: 1 ASCG 5 / 38
Location: 230..724

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion system effector, Hcp1 family n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8I064_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 164.0
  • Bit_score: 242
  • Evalue 2.40e-61
Type VI secretion system effector, Hcp1 family {ECO:0000313|EMBL:EIT69356.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 164.0
  • Bit_score: 242
  • Evalue 3.40e-61
type VI secretion system effector; K11903 type VI secretion system secreted protein Hcp similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 166.0
  • Bit_score: 168
  • Evalue 2.40e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrocarboniphaga effusa → Hydrocarboniphaga → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGGCATTCGATGCATTCATCCAGCTTGAAGGGATCAAGGGAGAAAGCACGGACGAGAAGCACAAGGACTGGATCGAGATCCAGAACTACGGCTTCGGCGCGGCCCAGCCCCAGTCGAACACCGCATCGTCGTCGGGCAACCTCGGGTCGGCGCGGGTCGAGGTGAAGAACTTCAGCTTCCTGCACAACCTGGACATCGCCAGCCCCAAGCTGTTCGAATACTGCTGCACCGGGGCCACGATTCCCAAGGCGACCATCACCCTGAACCGCGCCGGCGGCCAGAAAGAGAAGTACATGGAGTACAAGCTGACTGACGTGATCGTGACTTCGGTCAATCGTGACGGCGCCGCCGACAACACGCAGGACGTGCCGCTGGAAGCCGTTGCGCTGGGCTTCGGCAAGATCGAGATGACCTACAGCAAGATCGGCATCGACGGGAAATCCTCCGGCAACGCATCCGCCGGCTGGGACCTGAAGAAGAACGTAAAGGTGTGA
PROTEIN sequence
Length: 165
MAFDAFIQLEGIKGESTDEKHKDWIEIQNYGFGAAQPQSNTASSSGNLGSARVEVKNFSFLHNLDIASPKLFEYCCTGATIPKATITLNRAGGQKEKYMEYKLTDVIVTSVNRDGAADNTQDVPLEAVALGFGKIEMTYSKIGIDGKSSGNASAGWDLKKNVKV*