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SCNpilot_expt_500_p_scaffold_49655_2

Organism: SCNPILOT_CONT_300_BF_Burkholderiales_67_33

partial RP 20 / 55 MC: 2 BSCG 23 / 51 MC: 1 ASCG 5 / 38
Location: 733..1131

Top 3 Functional Annotations

Value Algorithm Source
2-methylcitrate dehydratase n=1 Tax=Pseudomonas psychrophila RepID=UPI0002F95F4A similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 122.0
  • Bit_score: 185
  • Evalue 2.80e-44
2-methylcitrate dehydratase {ECO:0000313|EMBL:KHO66479.1}; TaxID=400095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas tuomuerensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 122.0
  • Bit_score: 186
  • Evalue 2.30e-44
propionate catabolism protein similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 122.0
  • Bit_score: 181
  • Evalue 2.20e-43

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Taxonomy

Pseudomonas tuomuerensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 399
ATGGACAAGACCAGCCTGGCGCGGGACGGCGCCACCGGCGCCCTGTGCGAATTCGTGGCGGCGCTGCGTTTCGAGGACCTGCCCCCGGCGTTGGTGGACCGGACCGAGGACCTGTTCCTGGACTGGGTGGCGTCGGCCCTGGCCGGGAAGGGCGGGCATCCGGTGCCGCTGTTCGAGCGCTATGCCGCCGCGATGGGGCCGGCGCAGGGGCGCTGCGCGATCCTGACCAACCGGCGGACCACGTCGGCGCATTTCGCCGCGCTGGTCAACGGCGCGGCCTCGCACCTGGTCGAGCAGGACGACCTGCACAACAGTTCGGTGCTGCATCCGGCCACCGTGGTGTTTCCCGCCGTCTTCGCCGCGGCGCAGGACCTGGGCAAGTCGGGCAGCGAGATGCTG
PROTEIN sequence
Length: 133
MDKTSLARDGATGALCEFVAALRFEDLPPALVDRTEDLFLDWVASALAGKGGHPVPLFERYAAAMGPAQGRCAILTNRRTTSAHFAALVNGAASHLVEQDDLHNSSVLHPATVVFPAVFAAAQDLGKSGSEML