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SCNpilot_expt_500_p_scaffold_49906_1

Organism: SCNPILOT_CONT_300_BF_Burkholderiales_67_33

partial RP 20 / 55 MC: 2 BSCG 23 / 51 MC: 1 ASCG 5 / 38
Location: 1..429

Top 3 Functional Annotations

Value Algorithm Source
RND multidrug efflux transporter n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UFE5_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 142.0
  • Bit_score: 207
  • Evalue 9.80e-51
RND multidrug efflux transporter {ECO:0000313|EMBL:EGP55046.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 142.0
  • Bit_score: 207
  • Evalue 1.40e-50
Putative multidrug-efflux system transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 142.0
  • Bit_score: 205
  • Evalue 1.50e-50

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 429
GATGCCGTGGGCCTGGGCGATTACCTGACCCGGAACGTGCTGAGCGAAATCCGCCGTATCCCGGGTGTGGGCCGGGCGCAGTTGTTCGCCTCGCAGCGGGGCATGCGCATCTGGATCGACCCGGCCAAGCTGGTGGGCTTCAAGCTGTCCGCGGCGGACGTCAATGCCGCGATCGCGAGCCAGAACGTGCAACTGCCGGCGGGCGCCATCGGCGACCAGCCCAACCTGCCGGACCAGCAGATCACCGCGACCATCTCGGTGCGCGGCCAGTTGGCCACGCCCGAGGAGTTCGGCAACATCGTGCTGCGCGCGAATCCGGACGGCTCGTCCGTGCGCCTGCGCGACGTCGCGCGCATCGAGGTCGGCGCCGAGTCCTACGCGTTCTCGTCGCGCCTGAACGGCAAGCCGACCGCCGCCGTGGCGGTGTAG
PROTEIN sequence
Length: 143
DAVGLGDYLTRNVLSEIRRIPGVGRAQLFASQRGMRIWIDPAKLVGFKLSAADVNAAIASQNVQLPAGAIGDQPNLPDQQITATISVRGQLATPEEFGNIVLRANPDGSSVRLRDVARIEVGAESYAFSSRLNGKPTAAVAV*