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SCNpilot_expt_500_p_scaffold_47329_2

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 4 / 55 BSCG 5 / 51 ASCG 1 / 38
Location: 555..1178

Top 3 Functional Annotations

Value Algorithm Source
ribonuclease R (EC:3.1.13.1); K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 208.0
  • Bit_score: 359
  • Evalue 9.20e-97
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 208.0
  • Bit_score: 359
  • Evalue 4.10e-96
Ribonuclease R n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKL9_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 208.0
  • Bit_score: 359
  • Evalue 2.90e-96

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
GTGGACAAACCGCGCGACAGGCGTTTCCCGGATCGCGAGACCATCGTCGCCTTCATTCGCACGCATCCCGGACAAGCCGGCACGCGCGAGATCGCCCGCGCGTTCAACTTGAAAAACGCCGATCGCGTCGAACTCAAGAAAATCCTGCGCGATCTCGCGAATGACGGCACGATCGTCAAGCGAGGCCGCAAGATGCGTCAGGCGGAGGAAACGCTGCCGCCGACGCTGATGGCCGACATCACCGGCCGCGACAGCGACGGCGAACTGCTCGCGACGCCGACCGAGTGGGACGAGGAAGCAGGCACTCCGCCGAAAATCCGCATTCACGTCCCGCGGCGCGCGAAGCCCGGCACCACTGCCGGCATCGGCGACCGCGCGCTGCTTCGCATCGAGGCGACGGAGCCCGACGACTCCGCGCCTTATCGCGCCCGCGTCATCAAGGTGATCGATCACACCCGCTCGCGCATCCTCGGCATCTACCGCGTCCTGCCGCAGGGCGGCGGTCGCCTCGTGCCGGTCGACAAGAAGCAGGCCGGCCGTGAATTGAACATCGCGAAGGCCGACAGCGCCGGCGCGGAGGACGGCGATCTGGTCAGCGCCGAGCTTGTGCGCACCCGCGGTTTC
PROTEIN sequence
Length: 208
VDKPRDRRFPDRETIVAFIRTHPGQAGTREIARAFNLKNADRVELKKILRDLANDGTIVKRGRKMRQAEETLPPTLMADITGRDSDGELLATPTEWDEEAGTPPKIRIHVPRRAKPGTTAGIGDRALLRIEATEPDDSAPYRARVIKVIDHTRSRILGIYRVLPQGGGRLVPVDKKQAGRELNIAKADSAGAEDGDLVSAELVRTRGF