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SCNpilot_expt_500_p_scaffold_54063_2

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

partial RP 4 / 55 BSCG 5 / 51 ASCG 1 / 38
Location: comp(554..1051)

Top 3 Functional Annotations

Value Algorithm Source
2',5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 164.0
  • Bit_score: 301
  • Evalue 1.80e-79
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 164.0
  • Bit_score: 301
  • Evalue 8.10e-79
2',5' RNA ligase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQR0_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 164.0
  • Bit_score: 301
  • Evalue 5.80e-79

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
GTCTGCCGCATACTGTCCGATCTGCGCGGCGGTCTGCCCGGCGCCCGCTGGATCGATCCCGAAAATTACCATCTCACGCTGCGCTTCATCGGCGATATCGACGGCGCATCCGCCAACGAGATCGCGTCGGTGCTGCTGCGGGTCAACCGCAAACCATTCGAGGTGACGCTGCGCGGGCTGTCCAGTTTCGGCGGCAAGAAACCGCGCGCCGTCGTCGCTTCGGTGGAGCCGAGCGGGCCGCTGGTCGAGTTGCAGGCCGAACTCGAACGGCTGATCCAGCGCTGCGGGCTCGATCCCGAGAGCCGCAAGTTCACGCCTCACGTGACGCTGGCTCGGCTGCGCGACGCATCCAACCATGACGTCGCGAACTATCTGTCGGTGCGGGGCTATTTTCCGTCCAAAGTCTTCACCGCCGAGCGTTTCGTGCTGTTCTCCTCGCGCGCCTCGGTCGGCGGCGGACCTTATGTGGTGGAGGATTCCTACGCGCTCAGCCCGTAA
PROTEIN sequence
Length: 166
VCRILSDLRGGLPGARWIDPENYHLTLRFIGDIDGASANEIASVLLRVNRKPFEVTLRGLSSFGGKKPRAVVASVEPSGPLVELQAELERLIQRCGLDPESRKFTPHVTLARLRDASNHDVANYLSVRGYFPSKVFTAERFVLFSSRASVGGGPYVVEDSYALSP*