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SCNpilot_expt_500_p_scaffold_23395_2

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 15 / 55 MC: 1 BSCG 15 / 51 ASCG 6 / 38
Location: 1830..2228

Top 3 Functional Annotations

Value Algorithm Source
Alginate regulatory protein AlgP n=1 Tax=Pseudomonas sp. M47T1 RepID=I4N730_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 123.0
  • Bit_score: 68
  • Evalue 5.00e-09
Alginate regulatory protein AlgP {ECO:0000313|EMBL:EIK97270.1}; TaxID=1179778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. M47T1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.0
  • Coverage: 123.0
  • Bit_score: 68
  • Evalue 7.10e-09
hup; DNA-binding protein HU; K03530 DNA-binding protein HU-beta similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 112.0
  • Bit_score: 67
  • Evalue 2.70e-09

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Taxonomy

Pseudomonas sp. M47T1 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 399
ATGTCCAAGAAAACGCGCAAGAAATCATCTAAAACACTGGTCAGTACACCTGCGCGCGCCAAGTCCCGGAAGTCGGCCACGGCGAAGAGCTCTGCCGGCAAAGCACCCGCCACCCGAAAGCAGGCCGCCCCCAAGGTTGCAAAAGCCAAGGCTGCGAAGGCCAAAGCCGTTAAGGCCAAGGCGAAGACGACGGCCAAGACGGCACGCCCCACTCCAGCCCCTGCTCGGCCTGCGATGCCGTCGAAAACCAAGCCGACCGCGACCAAAGCAAGCAAAAAAAATGCGGCGAAAACGGTCTCCAAGCCGGATCATCAGCCCTTGGCGTCACCGCCCCCCGCCATCGCTGCCGAATCGGTCCGTCATAGCGGACCGCTCGCCGAGGGCATGACGATCCCGAAC
PROTEIN sequence
Length: 133
MSKKTRKKSSKTLVSTPARAKSRKSATAKSSAGKAPATRKQAAPKVAKAKAAKAKAVKAKAKTTAKTARPTPAPARPAMPSKTKPTATKASKKNAAKTVSKPDHQPLASPPPAIAAESVRHSGPLAEGMTIPN