ggKbase home page

SCNpilot_expt_500_p_scaffold_24378_1

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 15 / 55 MC: 1 BSCG 15 / 51 ASCG 6 / 38
Location: 2..1690

Top 3 Functional Annotations

Value Algorithm Source
lactate permease n=1 Tax=Afipia birgiae RepID=UPI0002FCACCC similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 555.0
  • Bit_score: 950
  • Evalue 1.00e-273
  • rbh
Lactate permease (LctP) family transporter {ECO:0000313|EMBL:EKS37114.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 554.0
  • Bit_score: 946
  • Evalue 1.60e-272
L-lactate transport; K03303 lactate transporter, LctP family similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 554.0
  • Bit_score: 927
  • Evalue 1.80e-267
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1689
AGAAACCCGGGGGGAGCGAGAGCGATGTGGGATCAACATTATAATCCGATGGACAACGCCGCGTTGTCGACGATCGCCGCGGCAATACCGGTTATTACCCTGCTGGTCCTGATTGCCAGCGGCAAGGTCAAGGCGCACATCGCAGCGATCACCGCGTTGATCGTTGCCAATCTGATCGCGATTTTCATCTTCACGATGCCGGCCGGCATGTCGATCCGGGCCTCGCTGCTCGGCGTCGTCGTCGGGTTCTTCCCGATCGGCTGGATCGTTCTCAACGTCATCTTCATGTATCAGCTCACCGTGGCGTCGGGGCGCTTCGAGACCTTGCAACGCGCCATCGGCGGCGTGACAACCGATCGGCGCATTCAGTTGCTGCTGATCGCGTTCTCCTTCGGCGCCTTCTTCGAAGGCGCTTCGGGCTTCGGTACACCGGTGGCGATCACCGGCGCGATCCTGATCGGCCTCGGCTTTTCGCCGCTCGCCGCGTCCGGCCTGTCGCTGATCGCCAACACCGCACCAGTGGCTTATGGCGCACTGGGCACGCCCATTCAGGGCCTTGCCTCGGTCACCGGGCTCGATCCGTACCTGCTCGGCGCGATGGTCGGCCGGCAATTGCCGGTCTTTTCGCTCATCGTGCCGTTCTGGGTGATCTGGGCTTTTGCCGGATGGAAGGGCATGAAGGAGGTGTGGCCGGCCATTCTGGTCACCGGCGTTTCGTTCGCCATCCCGCAATTCATCATCTCGAACTACATTAATCCGTGGATCGTCGATATCGGCGCCTCGCTGATCTCGATGGGCTGTCTGATTCTGTTCCTGCGGGTGTGGCAGCCGAAAACCTTGTGGACCTCGCCGGCGCTGCGCAGCCACGATATTTCGGCGGACCTCGCCAAGCCCGACAAGAGCACCACGCTGCCGGCGCTGACGCAGGCCGAGGTCTGGTCGTCGGTGTTGCCGTGGATCATCGTCTGCGCCGTGCTGCTGATCTGGGGCACCGGCTGGTTCAAGAACGCGGTGAATCCGATCTTCACCTGGAACTACGCCGTTCCTGAACTCCACAACATGATCAACAAGGTGGCGCCGATCGTCGCCAAGCCGACGCCGGAAGCGGCCGTTTTCTCATTCCAGTACCTGTCGTTCACGGGTACCGGCATGTTGATCGCGGCAGTGATCTCCGGTCTGGTGATGGGCTTCTCGCCCGCCAAGATCATCGGCATCTATGGCAGCACCATCCGGCTTTGCGCGATTTCGCTGATCACGATCTCCGCCATGCTGGCGATCGGAACGCTGACCCGTCTGTCGGGCATCGACGCGACCCTTGGTCTCGCCTTTGCCGCGACCGGTGTGCTGTACCCGTTCTTCGGCACCTTGCTGGGTTGGTTGGGTGTCGCGTTGACCGGGTCGGACACGGCCTCGAACGTGCTGTTCGGCAACCTGCAGCGCATCACTTCGGAACAGCTTGGTCTGTCGCCGATCCTGATGAGCGCCGCCAACTCGTCGGGCGGTGTCATGGGCAAGATGATCGACGCACAATCGATCGTCGTCGCCTCGACCGCGACCAACTGGTACGGGCATGAAGGAAGCATCCTGCGCTTCGTGTTCAAGCATTCGATCACGCTGGCCTGCCTGGTCGGCTTGTTCGTCATGCTGCAGGCTTACGTCTATCCGTTCACGCTGATGATCGTGAAGTAA
PROTEIN sequence
Length: 563
RNPGGARAMWDQHYNPMDNAALSTIAAAIPVITLLVLIASGKVKAHIAAITALIVANLIAIFIFTMPAGMSIRASLLGVVVGFFPIGWIVLNVIFMYQLTVASGRFETLQRAIGGVTTDRRIQLLLIAFSFGAFFEGASGFGTPVAITGAILIGLGFSPLAASGLSLIANTAPVAYGALGTPIQGLASVTGLDPYLLGAMVGRQLPVFSLIVPFWVIWAFAGWKGMKEVWPAILVTGVSFAIPQFIISNYINPWIVDIGASLISMGCLILFLRVWQPKTLWTSPALRSHDISADLAKPDKSTTLPALTQAEVWSSVLPWIIVCAVLLIWGTGWFKNAVNPIFTWNYAVPELHNMINKVAPIVAKPTPEAAVFSFQYLSFTGTGMLIAAVISGLVMGFSPAKIIGIYGSTIRLCAISLITISAMLAIGTLTRLSGIDATLGLAFAATGVLYPFFGTLLGWLGVALTGSDTASNVLFGNLQRITSEQLGLSPILMSAANSSGGVMGKMIDAQSIVVASTATNWYGHEGSILRFVFKHSITLACLVGLFVMLQAYVYPFTLMIVK*