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SCNpilot_expt_500_p_scaffold_25715_1

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 15 / 55 MC: 1 BSCG 15 / 51 ASCG 6 / 38
Location: comp(37..1248)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid transport system substrate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HAU4_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 403.0
  • Bit_score: 705
  • Evalue 3.20e-200
  • rbh
ABC transporter permease {ECO:0000313|EMBL:KJC60967.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 403.0
  • Bit_score: 715
  • Evalue 5.70e-203
urea/short-chain binding protein of ABC transporter; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 407.0
  • Bit_score: 695
  • Evalue 8.00e-198
  • rbh

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Taxonomy

Bradyrhizobium sp. LTSPM299 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
ATGTTCGCTAGAAGTATATCTGTCCTCGCAGCATTGGCGGCCGCGTTGCTGTCAACATCGGCAGCGCAAGCGCAAGTGTCCGATGACATGGTGAAAATCGGCGTACTGACCGATATGTCAGGGCCGGCATCGACGCCGACCGGTCAGGGATCGGTCACCGCGGCGCAGATGGCCGTGGAGGATTTCGGCGGCACCGTGCTCGGCAAGCCGATATCGGTGATCGTCGGCGACCATCAACTCAAGCCGGACATCGGCTCCGGTATTGCGCGCCGCTGGTACGATACGGAGCAAGTGGACCTGATCCTCGACGTTCCGGTCTCCGCTGTCGGACTGGCAGTACAAAGCGTCGCCAATGACCGTCGCAAGCTGATGATTACCCACGCGACTGGATCGGCTGATTTCCATGGCAAGTTCTGTTCACCCTACGCCATTCAGTGGGTGTTCGATACGCGCGCCCTCGCCGTCGGTACCGCGCAGGAAGTCGTCAAACGCGGCGGCGATAGCTGGTTCTTCATCACGGACGACTATGCTTTCGGACATTCGCTCGAACGCGACGCATCTGCGGTCATCACCAAGAATGGCGGCAAGGTCGTCGGCTCGGTGCGCCCGCCGTTCGCAACGCCGGACTTATCATCCTTCGTGCTGCAGGCTCAGGCATCCAAGGCCAAGATCATCGGCATCGCCGGTGGCCCGCCGAACAACACCACCGCGATCAAGACCGGCGGCGAATTCGGCGTCTTCAAGGGCGGCCAACAGATGGCCGGCCTGCTGGTGCTGATTACCGACATCCACGCGCTGGGATTGCCGGTTGCTCAGGGCCTGCTGCTGACCACGTCGTTCTATTGGGATATGGACGACAAGACCCGCGAATGGTCGAAGCGCTACTTCGCCAAGATGAACCGCATGCCGACGATGTGGCAGGCCGGCGTCTATTCTTCGGTCATCAACTACCTCAACGCCATCAAGAATGCCGGCACCGACGATCCGCTAAAGGTTGCCGCAAAGATGCGTGAAAAGCCGATCGAGGATTTCTTCTCGCGTAACGGCAAGCTGCGCGAAGACAACCTGATGGTCCACGATCTGGTTCTGGTGCAGGTCAAGACGCCGCAAGAATCCAAGTATCCGTGGGATTACTACAAGATCCTGACGCGCATCTCCGGCGACGAGGCGTTCGGTCCGCCGGATCCGGCCTGCTCGCTGGTCAAGAAGTAG
PROTEIN sequence
Length: 404
MFARSISVLAALAAALLSTSAAQAQVSDDMVKIGVLTDMSGPASTPTGQGSVTAAQMAVEDFGGTVLGKPISVIVGDHQLKPDIGSGIARRWYDTEQVDLILDVPVSAVGLAVQSVANDRRKLMITHATGSADFHGKFCSPYAIQWVFDTRALAVGTAQEVVKRGGDSWFFITDDYAFGHSLERDASAVITKNGGKVVGSVRPPFATPDLSSFVLQAQASKAKIIGIAGGPPNNTTAIKTGGEFGVFKGGQQMAGLLVLITDIHALGLPVAQGLLLTTSFYWDMDDKTREWSKRYFAKMNRMPTMWQAGVYSSVINYLNAIKNAGTDDPLKVAAKMREKPIEDFFSRNGKLREDNLMVHDLVLVQVKTPQESKYPWDYYKILTRISGDEAFGPPDPACSLVKK*