ggKbase home page

SCNpilot_expt_500_p_scaffold_26343_2

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 15 / 55 MC: 1 BSCG 15 / 51 ASCG 6 / 38
Location: 1482..2003

Top 3 Functional Annotations

Value Algorithm Source
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJL5_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 168.0
  • Bit_score: 264
  • Evalue 1.10e-67
twin-arginine translocation pathway signal similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 168.0
  • Bit_score: 264
  • Evalue 3.40e-68
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ABE63582.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 168.0
  • Bit_score: 264
  • Evalue 1.50e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGGTAAAACGCTTAACGGGCGATCACGAATTTAAGGCGGCGGTCTCGCGCCGCACGCTGCTTCAAGCCGGCGCCGGCCTTGCTGGCGGCATGATGATCCCCGGTTTCTCGATGCCGGTTTATGCCGCAGATCATCCTCCGATCGGAACCTATCCGGCTGGTTCGTCGGGAAACACGATCTATATCGGCGCCGCCGTTCCGCGCACGGGTTCTTACGCCGTCCAGGGCGAAGACGAACTGAAGGGAATGGAACTCGCGGTGGAGCACCTCAACGCGGGGCATGACCTGGTCAAGAAGATGTCGCCCAAGAGCAAGAAGGGCGTTCTCGGCAAGGAAGTTAAGCTGGTTGTCGCCGACTCGGCCGCCAAACCAAATCAGGCCGTGCAGGCCCAGCAACGCTTCATCACCGAGAACAAGGTCGTCCTGATGACCGGCTCGACATCGTCGGCGGTCGCGGTTGCCCTCAACAAGCTCGCTCAACGCGAGAAGGTTCTCTACGTCGCCGGCATCTCCGGTTCCAAC
PROTEIN sequence
Length: 174
MVKRLTGDHEFKAAVSRRTLLQAGAGLAGGMMIPGFSMPVYAADHPPIGTYPAGSSGNTIYIGAAVPRTGSYAVQGEDELKGMELAVEHLNAGHDLVKKMSPKSKKGVLGKEVKLVVADSAAKPNQAVQAQQRFITENKVVLMTGSTSSAVAVALNKLAQREKVLYVAGISGSN